Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RITA1Q96K30 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RITA1Q96K30 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RITA1Q96K30 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RITA1Q96K30 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RITA1Q96K30 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RITA1Q96K30 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RITA1Q96K30 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RITA1Q96K30 POU5F1P4-201ENST00000413175 1085 ntBASIC16.74■□□□□ 0.27
RITA1Q96K30 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.74■□□□□ 0.27
RITA1Q96K30 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.74■□□□□ 0.27
RITA1Q96K30 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.74■□□□□ 0.27
RITA1Q96K30 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.74■□□□□ 0.27
RITA1Q96K30 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RITA1Q96K30 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RITA1Q96K30 PLK5-205ENST00000642079 1969 ntBASIC16.74■□□□□ 0.27
RITA1Q96K30 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.74■□□□□ 0.27
RITA1Q96K30 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RITA1Q96K30 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RITA1Q96K30 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RITA1Q96K30 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RITA1Q96K30 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RITA1Q96K30 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RITA1Q96K30 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
RITA1Q96K30 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.73■□□□□ 0.27
RITA1Q96K30 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RITA1Q96K30 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RITA1Q96K30 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RITA1Q96K30 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.73■□□□□ 0.27
RITA1Q96K30 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RITA1Q96K30 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RITA1Q96K30 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RITA1Q96K30 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RITA1Q96K30 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.73■□□□□ 0.27
RITA1Q96K30 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RITA1Q96K30 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RITA1Q96K30 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RITA1Q96K30 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.73■□□□□ 0.27
RITA1Q96K30 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RITA1Q96K30 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RITA1Q96K30 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RITA1Q96K30 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RITA1Q96K30 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RITA1Q96K30 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RITA1Q96K30 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.72■□□□□ 0.27
RITA1Q96K30 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RITA1Q96K30 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RITA1Q96K30 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RITA1Q96K30 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RITA1Q96K30 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RITA1Q96K30 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.72■□□□□ 0.27
RITA1Q96K30 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.72■□□□□ 0.27
RITA1Q96K30 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.72■□□□□ 0.27
RITA1Q96K30 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RITA1Q96K30 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RITA1Q96K30 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.72■□□□□ 0.27
RITA1Q96K30 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.72■□□□□ 0.27
RITA1Q96K30 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RITA1Q96K30 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RITA1Q96K30 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RITA1Q96K30 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RITA1Q96K30 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.71■□□□□ 0.27
RITA1Q96K30 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RITA1Q96K30 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.71■□□□□ 0.27
RITA1Q96K30 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RITA1Q96K30 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RITA1Q96K30 KRT18P5-201ENST00000436075 1291 ntBASIC16.71■□□□□ 0.27
RITA1Q96K30 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.71■□□□□ 0.27
RITA1Q96K30 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.71■□□□□ 0.27
RITA1Q96K30 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RITA1Q96K30 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RITA1Q96K30 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RITA1Q96K30 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.7■□□□□ 0.26
RITA1Q96K30 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.7■□□□□ 0.26
RITA1Q96K30 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.7■□□□□ 0.26
RITA1Q96K30 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 KRT19P1-201ENST00000405746 1186 ntBASIC16.7■□□□□ 0.26
RITA1Q96K30 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.7■□□□□ 0.26
RITA1Q96K30 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.7■□□□□ 0.26
RITA1Q96K30 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.7■□□□□ 0.26
RITA1Q96K30 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RITA1Q96K30 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RITA1Q96K30 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RITA1Q96K30 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.69■□□□□ 0.26
RITA1Q96K30 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RITA1Q96K30 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RITA1Q96K30 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms