Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MS4A3Q96HJ5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A3Q96HJ5 LINC02228-203ENST00000641970 1355 ntBASIC18.66■□□□□ 0.58
MS4A3Q96HJ5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A3Q96HJ5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MS4A3Q96HJ5 AC007952.6-201ENST00000573168 2673 ntBASIC18.66■□□□□ 0.58
MS4A3Q96HJ5 AC003957.1-201ENST00000625108 2673 ntBASIC18.66■□□□□ 0.58
MS4A3Q96HJ5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 CCDC92B-201ENST00000575506 885 ntBASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MS4A3Q96HJ5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.64■□□□□ 0.58
MS4A3Q96HJ5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MS4A3Q96HJ5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 AC005224.4-201ENST00000583262 1652 ntBASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 AC092953.2-201ENST00000608000 699 ntBASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 AC009237.3-201ENST00000393279 1427 ntBASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A3Q96HJ5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 AC026471.6-201ENST00000622954 1905 ntBASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 AL034346.1-201ENST00000568244 1277 ntBASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.63■□□□□ 0.57
MS4A3Q96HJ5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 TERF1P2-201ENST00000583350 1212 ntBASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A3Q96HJ5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 AP006587.3-201ENST00000525742 1516 ntBASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms