Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.49■□□□□ 0.55
APH1AQ96BI3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.49■□□□□ 0.55
APH1AQ96BI3 TERF1P5-201ENST00000477545 1207 ntBASIC18.49■□□□□ 0.55
APH1AQ96BI3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.49■□□□□ 0.55
APH1AQ96BI3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.49■□□□□ 0.55
APH1AQ96BI3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.49■□□□□ 0.55
APH1AQ96BI3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.49■□□□□ 0.55
APH1AQ96BI3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
APH1AQ96BI3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1AQ96BI3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1AQ96BI3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.48■□□□□ 0.55
APH1AQ96BI3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1AQ96BI3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
APH1AQ96BI3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1AQ96BI3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.48■□□□□ 0.55
APH1AQ96BI3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.48■□□□□ 0.55
APH1AQ96BI3 DUX4L16-201ENST00000555130 1264 ntBASIC18.48■□□□□ 0.55
APH1AQ96BI3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.48■□□□□ 0.55
APH1AQ96BI3 AC231657.2-201ENST00000624556 255 ntBASIC18.48■□□□□ 0.55
APH1AQ96BI3 AC013268.1-206ENST00000638368 961 ntBASIC18.48■□□□□ 0.55
APH1AQ96BI3 AC112229.1-201ENST00000639295 961 ntBASIC18.48■□□□□ 0.55
APH1AQ96BI3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1AQ96BI3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1AQ96BI3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1AQ96BI3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1AQ96BI3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APH1AQ96BI3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APH1AQ96BI3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APH1AQ96BI3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APH1AQ96BI3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
APH1AQ96BI3 Z98882.1-201ENST00000622160 2253 ntBASIC18.47■□□□□ 0.55
APH1AQ96BI3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.47■□□□□ 0.55
APH1AQ96BI3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.47■□□□□ 0.55
APH1AQ96BI3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.47■□□□□ 0.55
APH1AQ96BI3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
APH1AQ96BI3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
APH1AQ96BI3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.47■□□□□ 0.55
APH1AQ96BI3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APH1AQ96BI3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
APH1AQ96BI3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
APH1AQ96BI3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APH1AQ96BI3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
APH1AQ96BI3 RBM17P2-201ENST00000616397 1405 ntBASIC18.47■□□□□ 0.55
APH1AQ96BI3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APH1AQ96BI3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
APH1AQ96BI3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.47■□□□□ 0.55
APH1AQ96BI3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1AQ96BI3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.46■□□□□ 0.55
APH1AQ96BI3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.46■□□□□ 0.55
APH1AQ96BI3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.46■□□□□ 0.55
APH1AQ96BI3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.46■□□□□ 0.55
APH1AQ96BI3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
APH1AQ96BI3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1AQ96BI3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1AQ96BI3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1AQ96BI3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1AQ96BI3 AC007322.1-201ENST00000426983 750 ntBASIC18.46■□□□□ 0.55
APH1AQ96BI3 CDCA4P2-201ENST00000441182 718 ntBASIC18.46■□□□□ 0.55
APH1AQ96BI3 AC026185.1-201ENST00000445748 174 ntBASIC18.46■□□□□ 0.55
APH1AQ96BI3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
APH1AQ96BI3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.46■□□□□ 0.55
APH1AQ96BI3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
APH1AQ96BI3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
APH1AQ96BI3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1AQ96BI3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
APH1AQ96BI3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1AQ96BI3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
APH1AQ96BI3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
APH1AQ96BI3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
APH1AQ96BI3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.46■□□□□ 0.55
APH1AQ96BI3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.46■□□□□ 0.55
APH1AQ96BI3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
APH1AQ96BI3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
APH1AQ96BI3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.45■□□□□ 0.54
APH1AQ96BI3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
APH1AQ96BI3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APH1AQ96BI3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APH1AQ96BI3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.45■□□□□ 0.54
APH1AQ96BI3 AC090192.1-201ENST00000517740 490 ntBASIC18.45■□□□□ 0.54
APH1AQ96BI3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.45■□□□□ 0.54
APH1AQ96BI3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
APH1AQ96BI3 AC243732.1-201ENST00000612648 864 ntBASIC18.45■□□□□ 0.54
APH1AQ96BI3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APH1AQ96BI3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APH1AQ96BI3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
APH1AQ96BI3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.44■□□□□ 0.54
APH1AQ96BI3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
APH1AQ96BI3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
APH1AQ96BI3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
APH1AQ96BI3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
APH1AQ96BI3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms