Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF25Q96BH1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF25Q96BH1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF25Q96BH1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF25Q96BH1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
RNF25Q96BH1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
RNF25Q96BH1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF25Q96BH1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF25Q96BH1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RNF25Q96BH1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF25Q96BH1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF25Q96BH1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RNF25Q96BH1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF25Q96BH1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.83■■□□□ 1.09
RNF25Q96BH1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF25Q96BH1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF25Q96BH1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.83■■□□□ 1.09
RNF25Q96BH1 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF25Q96BH1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF25Q96BH1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF25Q96BH1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF25Q96BH1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF25Q96BH1 MIR6084-201ENST00000622012 110 ntBASIC21.83■■□□□ 1.09
RNF25Q96BH1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF25Q96BH1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF25Q96BH1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
RNF25Q96BH1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
RNF25Q96BH1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.83■■□□□ 1.08
RNF25Q96BH1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF25Q96BH1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF25Q96BH1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF25Q96BH1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RNF25Q96BH1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF25Q96BH1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF25Q96BH1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
RNF25Q96BH1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF25Q96BH1 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.82■■□□□ 1.08
RNF25Q96BH1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF25Q96BH1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.82■■□□□ 1.08
RNF25Q96BH1 AC005837.3-201ENST00000612163 286 ntBASIC21.82■■□□□ 1.08
RNF25Q96BH1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF25Q96BH1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF25Q96BH1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF25Q96BH1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF25Q96BH1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF25Q96BH1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF25Q96BH1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF25Q96BH1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RNF25Q96BH1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF25Q96BH1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RNF25Q96BH1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF25Q96BH1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF25Q96BH1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RNF25Q96BH1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF25Q96BH1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF25Q96BH1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF25Q96BH1 AL354811.1-201ENST00000610286 706 ntBASIC21.81■■□□□ 1.08
RNF25Q96BH1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RNF25Q96BH1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF25Q96BH1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF25Q96BH1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF25Q96BH1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RNF25Q96BH1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF25Q96BH1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF25Q96BH1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
RNF25Q96BH1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF25Q96BH1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF25Q96BH1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF25Q96BH1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF25Q96BH1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
RNF25Q96BH1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF25Q96BH1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF25Q96BH1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF25Q96BH1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF25Q96BH1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF25Q96BH1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF25Q96BH1 FEM1AP1-201ENST00000431297 1995 ntBASIC21.79■■□□□ 1.08
RNF25Q96BH1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF25Q96BH1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RNF25Q96BH1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF25Q96BH1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF25Q96BH1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF25Q96BH1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RNF25Q96BH1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF25Q96BH1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.79■■□□□ 1.08
RNF25Q96BH1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.79■■□□□ 1.08
RNF25Q96BH1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.79■■□□□ 1.08
RNF25Q96BH1 TPRG1LP1-201ENST00000598702 760 ntBASIC21.79■■□□□ 1.08
RNF25Q96BH1 PLK5-205ENST00000642079 1969 ntBASIC21.79■■□□□ 1.08
RNF25Q96BH1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF25Q96BH1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF25Q96BH1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF25Q96BH1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF25Q96BH1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF25Q96BH1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF25Q96BH1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF25Q96BH1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF25Q96BH1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RNF25Q96BH1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF25Q96BH1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms