Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SCAMP4Q969E2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCAMP4Q969E2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCAMP4Q969E2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SCAMP4Q969E2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.76■□□□□ 0.91
SCAMP4Q969E2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.76■□□□□ 0.91
SCAMP4Q969E2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.76■□□□□ 0.91
SCAMP4Q969E2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCAMP4Q969E2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCAMP4Q969E2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 MIR663A-201ENST00000385250 93 ntBASIC20.75■□□□□ 0.91
SCAMP4Q969E2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCAMP4Q969E2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 AC245052.3-201ENST00000450182 901 ntBASIC20.74■□□□□ 0.91
SCAMP4Q969E2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 AC243732.1-201ENST00000612648 864 ntBASIC20.74■□□□□ 0.91
SCAMP4Q969E2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCAMP4Q969E2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 AC068338.2-201ENST00000563278 1430 ntBASIC20.73■□□□□ 0.91
SCAMP4Q969E2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 AC006970.2-201ENST00000450065 779 ntBASIC20.73■□□□□ 0.91
SCAMP4Q969E2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.73■□□□□ 0.91
SCAMP4Q969E2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 AC005181.1-201ENST00000604782 1256 ntBASIC20.73■□□□□ 0.91
SCAMP4Q969E2 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.73■□□□□ 0.91
SCAMP4Q969E2 AL050303.2-201ENST00000619798 666 ntBASIC20.73■□□□□ 0.91
SCAMP4Q969E2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SCAMP4Q969E2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCAMP4Q969E2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCAMP4Q969E2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SCAMP4Q969E2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SCAMP4Q969E2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.72■□□□□ 0.91
SCAMP4Q969E2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.72■□□□□ 0.91
SCAMP4Q969E2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCAMP4Q969E2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCAMP4Q969E2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCAMP4Q969E2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.72■□□□□ 0.91
SCAMP4Q969E2 AL024507.2-201ENST00000606070 2574 ntBASIC20.72■□□□□ 0.91
SCAMP4Q969E2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SCAMP4Q969E2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.71■□□□□ 0.91
SCAMP4Q969E2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 AC007322.4-201ENST00000509611 723 ntBASIC20.71■□□□□ 0.91
SCAMP4Q969E2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCAMP4Q969E2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms