Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPS4Y2Q8TD47 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 AC009237.3-201ENST00000393279 1427 ntBASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPS4Y2Q8TD47 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 AC007952.6-201ENST00000573168 2673 ntBASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 AC003957.1-201ENST00000625108 2673 ntBASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPS4Y2Q8TD47 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.22■□□□□ 0.51
RPS4Y2Q8TD47 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 BX842568.3-201ENST00000418104 571 ntBASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 AL512408.1-201ENST00000569378 2000 ntBASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.21■□□□□ 0.51
RPS4Y2Q8TD47 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.5
RPS4Y2Q8TD47 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.21■□□□□ 0.5
RPS4Y2Q8TD47 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms