Protein–RNA interactions for Protein: Q8TC05

MDM1, Nuclear protein MDM1, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1Q8TC05 pRNA.5-201ENST00000612139 90 ntBASIC21.56■■□□□ 1.04
MDM1Q8TC05 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MDM1Q8TC05 pRNA.11-201ENST00000618423 90 ntBASIC21.56■■□□□ 1.04
MDM1Q8TC05 pRNA.13-201ENST00000619112 90 ntBASIC21.56■■□□□ 1.04
MDM1Q8TC05 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.56■■□□□ 1.04
MDM1Q8TC05 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MDM1Q8TC05 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MDM1Q8TC05 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MDM1Q8TC05 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MDM1Q8TC05 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.56■■□□□ 1.04
MDM1Q8TC05 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MDM1Q8TC05 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
MDM1Q8TC05 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MDM1Q8TC05 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.55■■□□□ 1.04
MDM1Q8TC05 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MDM1Q8TC05 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
MDM1Q8TC05 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
MDM1Q8TC05 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.55■■□□□ 1.04
MDM1Q8TC05 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.55■■□□□ 1.04
MDM1Q8TC05 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.55■■□□□ 1.04
MDM1Q8TC05 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.55■■□□□ 1.04
MDM1Q8TC05 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MDM1Q8TC05 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MDM1Q8TC05 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MDM1Q8TC05 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MDM1Q8TC05 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
MDM1Q8TC05 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.55■■□□□ 1.04
MDM1Q8TC05 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.55■■□□□ 1.04
MDM1Q8TC05 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MDM1Q8TC05 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.54■■□□□ 1.04
MDM1Q8TC05 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.54■■□□□ 1.04
MDM1Q8TC05 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.54■■□□□ 1.04
MDM1Q8TC05 IGHV3-19-201ENST00000521488 291 ntBASIC21.54■■□□□ 1.04
MDM1Q8TC05 TERF1P2-201ENST00000583350 1212 ntBASIC21.54■■□□□ 1.04
MDM1Q8TC05 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MDM1Q8TC05 TMEM191A-211ENST00000637163 1067 ntBASIC21.54■■□□□ 1.04
MDM1Q8TC05 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MDM1Q8TC05 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MDM1Q8TC05 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.54■■□□□ 1.04
MDM1Q8TC05 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
MDM1Q8TC05 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MDM1Q8TC05 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MDM1Q8TC05 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
MDM1Q8TC05 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.53■■□□□ 1.04
MDM1Q8TC05 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
MDM1Q8TC05 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MDM1Q8TC05 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MDM1Q8TC05 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MDM1Q8TC05 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MDM1Q8TC05 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.53■■□□□ 1.04
MDM1Q8TC05 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
MDM1Q8TC05 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.53■■□□□ 1.04
MDM1Q8TC05 PCDHAC2-203ENST00000615316 3011 ntBASIC21.53■■□□□ 1.04
MDM1Q8TC05 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
MDM1Q8TC05 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MDM1Q8TC05 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
MDM1Q8TC05 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MDM1Q8TC05 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MDM1Q8TC05 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MDM1Q8TC05 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.52■■□□□ 1.04
MDM1Q8TC05 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.52■■□□□ 1.04
MDM1Q8TC05 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MDM1Q8TC05 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MDM1Q8TC05 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.52■■□□□ 1.04
MDM1Q8TC05 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MDM1Q8TC05 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.52■■□□□ 1.04
MDM1Q8TC05 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
MDM1Q8TC05 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MDM1Q8TC05 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MDM1Q8TC05 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MDM1Q8TC05 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MDM1Q8TC05 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
MDM1Q8TC05 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
MDM1Q8TC05 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MDM1Q8TC05 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MDM1Q8TC05 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MDM1Q8TC05 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
MDM1Q8TC05 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.51■■□□□ 1.03
MDM1Q8TC05 LINC02228-203ENST00000641970 1355 ntBASIC21.51■■□□□ 1.03
MDM1Q8TC05 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
MDM1Q8TC05 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.51■■□□□ 1.03
MDM1Q8TC05 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MDM1Q8TC05 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MDM1Q8TC05 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.51■■□□□ 1.03
MDM1Q8TC05 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.51■■□□□ 1.03
MDM1Q8TC05 AC104771.1-201ENST00000603335 964 ntBASIC21.51■■□□□ 1.03
MDM1Q8TC05 RAP2CP1-201ENST00000605103 478 ntBASIC21.51■■□□□ 1.03
MDM1Q8TC05 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.51■■□□□ 1.03
MDM1Q8TC05 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MDM1Q8TC05 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MDM1Q8TC05 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
MDM1Q8TC05 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
MDM1Q8TC05 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MDM1Q8TC05 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
MDM1Q8TC05 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.5■■□□□ 1.03
MDM1Q8TC05 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MDM1Q8TC05 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
MDM1Q8TC05 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
MDM1Q8TC05 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MDM1Q8TC05 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms