Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 GUSBP5-202ENST00000510805 1989 ntBASIC25.79■■□□□ 1.72
RTL9Q8NET4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
RTL9Q8NET4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTL9Q8NET4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTL9Q8NET4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.79■■□□□ 1.72
RTL9Q8NET4 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.79■■□□□ 1.72
RTL9Q8NET4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTL9Q8NET4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC25.79■■□□□ 1.72
RTL9Q8NET4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTL9Q8NET4 AL355472.2-201ENST00000422958 438 ntBASIC25.79■■□□□ 1.72
RTL9Q8NET4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC25.79■■□□□ 1.72
RTL9Q8NET4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.79■■□□□ 1.72
RTL9Q8NET4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC25.79■■□□□ 1.72
RTL9Q8NET4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC25.79■■□□□ 1.72
RTL9Q8NET4 ADM-205ENST00000528544 586 ntTSL 2 BASIC25.79■■□□□ 1.72
RTL9Q8NET4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTL9Q8NET4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC25.79■■□□□ 1.72
RTL9Q8NET4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC25.79■■□□□ 1.72
RTL9Q8NET4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTL9Q8NET4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC25.79■■□□□ 1.72
RTL9Q8NET4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTL9Q8NET4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RTL9Q8NET4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
RTL9Q8NET4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTL9Q8NET4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RTL9Q8NET4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.78■■□□□ 1.72
RTL9Q8NET4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RTL9Q8NET4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTL9Q8NET4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RTL9Q8NET4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RTL9Q8NET4 MCRIP2P1-201ENST00000394346 511 ntBASIC25.78■■□□□ 1.72
RTL9Q8NET4 SERPINH1P1-201ENST00000419794 1249 ntBASIC25.78■■□□□ 1.72
RTL9Q8NET4 AC007322.3-201ENST00000426526 701 ntBASIC25.78■■□□□ 1.72
RTL9Q8NET4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.78■■□□□ 1.72
RTL9Q8NET4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC25.78■■□□□ 1.72
RTL9Q8NET4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.78■■□□□ 1.72
RTL9Q8NET4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.78■■□□□ 1.72
RTL9Q8NET4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTL9Q8NET4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTL9Q8NET4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTL9Q8NET4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RTL9Q8NET4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTL9Q8NET4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTL9Q8NET4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTL9Q8NET4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTL9Q8NET4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.77■■□□□ 1.72
RTL9Q8NET4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTL9Q8NET4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTL9Q8NET4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTL9Q8NET4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC25.77■■□□□ 1.72
RTL9Q8NET4 LSM12P1-201ENST00000411836 588 ntBASIC25.77■■□□□ 1.72
RTL9Q8NET4 GCSHP5-201ENST00000443090 522 ntBASIC25.77■■□□□ 1.72
RTL9Q8NET4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.77■■□□□ 1.72
RTL9Q8NET4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
RTL9Q8NET4 OR2A1-AS1-201ENST00000462305 773 ntBASIC25.77■■□□□ 1.72
RTL9Q8NET4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC25.77■■□□□ 1.72
RTL9Q8NET4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC25.77■■□□□ 1.72
RTL9Q8NET4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC25.77■■□□□ 1.72
RTL9Q8NET4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RTL9Q8NET4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC25.77■■□□□ 1.72
RTL9Q8NET4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTL9Q8NET4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RTL9Q8NET4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTL9Q8NET4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTL9Q8NET4 ESRRAP1-201ENST00000400596 1257 ntBASIC25.76■■□□□ 1.71
RTL9Q8NET4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.76■■□□□ 1.71
RTL9Q8NET4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RTL9Q8NET4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.76■■□□□ 1.71
RTL9Q8NET4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTL9Q8NET4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC25.75■■□□□ 1.71
RTL9Q8NET4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTL9Q8NET4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25.75■■□□□ 1.71
RTL9Q8NET4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
RTL9Q8NET4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC25.75■■□□□ 1.71
RTL9Q8NET4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC25.75■■□□□ 1.71
RTL9Q8NET4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.75■■□□□ 1.71
RTL9Q8NET4 ECEL1P1-201ENST00000373592 1742 ntBASIC25.75■■□□□ 1.71
RTL9Q8NET4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
RTL9Q8NET4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTL9Q8NET4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
RTL9Q8NET4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTL9Q8NET4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
RTL9Q8NET4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTL9Q8NET4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTL9Q8NET4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
RTL9Q8NET4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC25.74■■□□□ 1.71
RTL9Q8NET4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTL9Q8NET4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTL9Q8NET4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.74■■□□□ 1.71
RTL9Q8NET4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RTL9Q8NET4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RTL9Q8NET4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.74■■□□□ 1.71
RTL9Q8NET4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTL9Q8NET4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RTL9Q8NET4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTL9Q8NET4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTL9Q8NET4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RTL9Q8NET4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC25.73■■□□□ 1.71
RTL9Q8NET4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RTL9Q8NET4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms