Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIMC1Q8NDZ2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SIMC1Q8NDZ2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SIMC1Q8NDZ2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SIMC1Q8NDZ2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIMC1Q8NDZ2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SIMC1Q8NDZ2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.62■□□□□ 0.73
SIMC1Q8NDZ2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIMC1Q8NDZ2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SIMC1Q8NDZ2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SIMC1Q8NDZ2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.62■□□□□ 0.73
SIMC1Q8NDZ2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIMC1Q8NDZ2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 AC034268.1-201ENST00000441047 882 ntBASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
SIMC1Q8NDZ2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SIMC1Q8NDZ2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 KRT18P5-201ENST00000436075 1291 ntBASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 NTF6G-201ENST00000591094 616 ntBASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SIMC1Q8NDZ2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SIMC1Q8NDZ2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SIMC1Q8NDZ2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SIMC1Q8NDZ2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIMC1Q8NDZ2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.58■□□□□ 0.73
SIMC1Q8NDZ2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIMC1Q8NDZ2 AC138907.5-202ENST00000569484 235 ntBASIC19.58■□□□□ 0.72
SIMC1Q8NDZ2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.58■□□□□ 0.72
SIMC1Q8NDZ2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIMC1Q8NDZ2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SIMC1Q8NDZ2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.58■□□□□ 0.72
SIMC1Q8NDZ2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIMC1Q8NDZ2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.58■□□□□ 0.72
SIMC1Q8NDZ2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIMC1Q8NDZ2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIMC1Q8NDZ2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SIMC1Q8NDZ2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIMC1Q8NDZ2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 AP001160.3-201ENST00000601484 763 ntBASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SIMC1Q8NDZ2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIMC1Q8NDZ2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms