Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 AC073210.2-201ENST00000430369 194 ntBASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 MIR4651-201ENST00000582622 73 ntBASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.6■■□□□ 1.53
SLC44A5Q8NCS7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 MIR4758-201ENST00000577688 71 ntBASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SLC44A5Q8NCS7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
SLC44A5Q8NCS7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24.58■■□□□ 1.53
SLC44A5Q8NCS7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SLC44A5Q8NCS7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.58■■□□□ 1.53
SLC44A5Q8NCS7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.58■■□□□ 1.53
SLC44A5Q8NCS7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SLC44A5Q8NCS7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.58■■□□□ 1.53
SLC44A5Q8NCS7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SLC44A5Q8NCS7 AL355472.2-201ENST00000422958 438 ntBASIC24.58■■□□□ 1.53
SLC44A5Q8NCS7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.58■■□□□ 1.53
SLC44A5Q8NCS7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
SLC44A5Q8NCS7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.58■■□□□ 1.53
SLC44A5Q8NCS7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
SLC44A5Q8NCS7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SLC44A5Q8NCS7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SLC44A5Q8NCS7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
SLC44A5Q8NCS7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SLC44A5Q8NCS7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SLC44A5Q8NCS7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24.57■■□□□ 1.52
SLC44A5Q8NCS7 TSPY20P-201ENST00000450910 630 ntBASIC24.57■■□□□ 1.52
SLC44A5Q8NCS7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.57■■□□□ 1.52
SLC44A5Q8NCS7 AC092118.2-201ENST00000613495 667 ntBASIC24.57■■□□□ 1.52
SLC44A5Q8NCS7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SLC44A5Q8NCS7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SLC44A5Q8NCS7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 FBXW4P1-201ENST00000426721 2239 ntBASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SLC44A5Q8NCS7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 AC083880.1-201ENST00000608266 535 ntBASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SLC44A5Q8NCS7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SLC44A5Q8NCS7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC44A5Q8NCS7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC44A5Q8NCS7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC44A5Q8NCS7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.54■■□□□ 1.52
SLC44A5Q8NCS7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms