Protein–RNA interactions for Protein: Q8NBK3

SUMF1, Sulfatase-modifying factor 1, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1Q8NBK3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
SUMF1Q8NBK3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUMF1Q8NBK3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.67■□□□□ 0.9
SUMF1Q8NBK3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.67■□□□□ 0.9
SUMF1Q8NBK3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.67■□□□□ 0.9
SUMF1Q8NBK3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 AC110285.5-201ENST00000611501 352 ntBASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 AC092865.7-201ENST00000641832 219 ntBASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SUMF1Q8NBK3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.65■□□□□ 0.9
SUMF1Q8NBK3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUMF1Q8NBK3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUMF1Q8NBK3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SUMF1Q8NBK3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SUMF1Q8NBK3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.65■□□□□ 0.9
SUMF1Q8NBK3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUMF1Q8NBK3 AC239809.2-201ENST00000415381 517 ntBASIC20.65■□□□□ 0.9
SUMF1Q8NBK3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.65■□□□□ 0.9
SUMF1Q8NBK3 PRKY-204ENST00000533551 1019 ntBASIC20.65■□□□□ 0.9
SUMF1Q8NBK3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.65■□□□□ 0.9
SUMF1Q8NBK3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.65■□□□□ 0.9
SUMF1Q8NBK3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SUMF1Q8NBK3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SUMF1Q8NBK3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SUMF1Q8NBK3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 RARRES2P10-201ENST00000564312 460 ntBASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SUMF1Q8NBK3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.62■□□□□ 0.89
SUMF1Q8NBK3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms