Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AC007375.3-201ENST00000600936 2314 ntBASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 AC090192.1-201ENST00000517740 490 ntBASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 AC013268.1-206ENST00000638368 961 ntBASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 AC112229.1-201ENST00000639295 961 ntBASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC01555Q8NAE3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01555Q8NAE3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01555Q8NAE3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
LINC01555Q8NAE3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01555Q8NAE3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01555Q8NAE3 AC026185.1-201ENST00000445748 174 ntBASIC20.12■□□□□ 0.81
LINC01555Q8NAE3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01555Q8NAE3 AC007322.4-201ENST00000509611 723 ntBASIC20.12■□□□□ 0.81
LINC01555Q8NAE3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.12■□□□□ 0.81
LINC01555Q8NAE3 AC231657.2-201ENST00000624556 255 ntBASIC20.12■□□□□ 0.81
LINC01555Q8NAE3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01555Q8NAE3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 AC091799.1-201ENST00000422823 811 ntBASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 AC007322.1-201ENST00000426983 750 ntBASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 CROCCP5-201ENST00000436658 830 ntBASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LINC01555Q8NAE3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01555Q8NAE3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01555Q8NAE3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LINC01555Q8NAE3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.1■□□□□ 0.81
LINC01555Q8NAE3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.1■□□□□ 0.81
LINC01555Q8NAE3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01555Q8NAE3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01555Q8NAE3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01555Q8NAE3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
LINC01555Q8NAE3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01555Q8NAE3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.1■□□□□ 0.81
LINC01555Q8NAE3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LINC01555Q8NAE3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 AC068338.2-201ENST00000563278 1430 ntBASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01555Q8NAE3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 AL049796.1-201ENST00000565336 1766 ntBASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 AL050303.2-201ENST00000619798 666 ntBASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.08■□□□□ 0.81
LINC01555Q8NAE3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms