Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.19■□□□□ 0.98
DNAAF3Q8N9W5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 AC027612.3-201ENST00000413684 1047 ntBASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNAAF3Q8N9W5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
DNAAF3Q8N9W5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNAAF3Q8N9W5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.17■□□□□ 0.98
DNAAF3Q8N9W5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
DNAAF3Q8N9W5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.17■□□□□ 0.98
DNAAF3Q8N9W5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.17■□□□□ 0.98
DNAAF3Q8N9W5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DNAAF3Q8N9W5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNAAF3Q8N9W5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DNAAF3Q8N9W5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNAAF3Q8N9W5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNAAF3Q8N9W5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 KRT87P-202ENST00000534226 1464 ntBASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DNAAF3Q8N9W5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNAAF3Q8N9W5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.15■□□□□ 0.98
DNAAF3Q8N9W5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DNAAF3Q8N9W5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.15■□□□□ 0.98
DNAAF3Q8N9W5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNAAF3Q8N9W5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNAAF3Q8N9W5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNAAF3Q8N9W5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNAAF3Q8N9W5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.15■□□□□ 0.98
DNAAF3Q8N9W5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.15■□□□□ 0.98
DNAAF3Q8N9W5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
DNAAF3Q8N9W5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNAAF3Q8N9W5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
DNAAF3Q8N9W5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
DNAAF3Q8N9W5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
DNAAF3Q8N9W5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.14■□□□□ 0.98
DNAAF3Q8N9W5 LINC02228-203ENST00000641970 1355 ntBASIC21.14■□□□□ 0.98
DNAAF3Q8N9W5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DNAAF3Q8N9W5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.14■□□□□ 0.97
DNAAF3Q8N9W5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.14■□□□□ 0.97
DNAAF3Q8N9W5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.14■□□□□ 0.97
DNAAF3Q8N9W5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.14■□□□□ 0.97
DNAAF3Q8N9W5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.14■□□□□ 0.97
DNAAF3Q8N9W5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.14■□□□□ 0.97
DNAAF3Q8N9W5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DNAAF3Q8N9W5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.14■□□□□ 0.97
DNAAF3Q8N9W5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
DNAAF3Q8N9W5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 AC061975.6-201ENST00000579045 1553 ntBASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 AP004607.4-201ENST00000530158 1459 ntBASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DNAAF3Q8N9W5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 AC008175.2-201ENST00000612840 297 ntBASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DNAAF3Q8N9W5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms