Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 AP004607.4-201ENST00000530158 1459 ntBASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 LINC02228-203ENST00000641970 1355 ntBASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LSMEM1Q8N8F7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 POU5F1P4-201ENST00000413175 1085 ntBASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 AC123595.1-201ENST00000440769 1046 ntBASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSMEM1Q8N8F7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 AC061975.6-201ENST00000579045 1553 ntBASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 AC006128.1-201ENST00000624704 1661 ntBASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSMEM1Q8N8F7 PLK5-205ENST00000642079 1969 ntBASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 AC138907.5-202ENST00000569484 235 ntBASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 AC008175.2-201ENST00000612840 297 ntBASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.02■□□□□ 0.64
LSMEM1Q8N8F7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LSMEM1Q8N8F7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LSMEM1Q8N8F7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LSMEM1Q8N8F7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LSMEM1Q8N8F7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.02■□□□□ 0.63
LSMEM1Q8N8F7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSMEM1Q8N8F7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms