Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CPSF7Q8N684 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPSF7Q8N684 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CPSF7Q8N684 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPSF7Q8N684 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPSF7Q8N684 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.33■□□□□ 0.85
CPSF7Q8N684 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPSF7Q8N684 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPSF7Q8N684 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPSF7Q8N684 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.33■□□□□ 0.85
CPSF7Q8N684 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.33■□□□□ 0.85
CPSF7Q8N684 MIR6821-201ENST00000617625 74 ntBASIC20.33■□□□□ 0.85
CPSF7Q8N684 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.33■□□□□ 0.84
CPSF7Q8N684 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
CPSF7Q8N684 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
CPSF7Q8N684 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.33■□□□□ 0.84
CPSF7Q8N684 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPSF7Q8N684 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.32■□□□□ 0.84
CPSF7Q8N684 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CPSF7Q8N684 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF7Q8N684 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF7Q8N684 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF7Q8N684 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF7Q8N684 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.32■□□□□ 0.84
CPSF7Q8N684 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF7Q8N684 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF7Q8N684 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.32■□□□□ 0.84
CPSF7Q8N684 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.32■□□□□ 0.84
CPSF7Q8N684 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.32■□□□□ 0.84
CPSF7Q8N684 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF7Q8N684 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF7Q8N684 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF7Q8N684 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF7Q8N684 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF7Q8N684 AP004607.7-201ENST00000527152 1677 ntBASIC20.32■□□□□ 0.84
CPSF7Q8N684 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF7Q8N684 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CPSF7Q8N684 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CPSF7Q8N684 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF7Q8N684 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF7Q8N684 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CPSF7Q8N684 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF7Q8N684 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF7Q8N684 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.31■□□□□ 0.84
CPSF7Q8N684 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CPSF7Q8N684 AC097381.1-201ENST00000429019 1296 ntBASIC20.31■□□□□ 0.84
CPSF7Q8N684 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.31■□□□□ 0.84
CPSF7Q8N684 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF7Q8N684 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF7Q8N684 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF7Q8N684 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF7Q8N684 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF7Q8N684 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.31■□□□□ 0.84
CPSF7Q8N684 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF7Q8N684 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF7Q8N684 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF7Q8N684 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 TSPY26P-201ENST00000476365 1326 ntBASIC20.3■□□□□ 0.84
CPSF7Q8N684 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF7Q8N684 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF7Q8N684 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF7Q8N684 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF7Q8N684 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF7Q8N684 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 AC092666.2-201ENST00000613287 246 ntBASIC20.3■□□□□ 0.84
CPSF7Q8N684 AC007952.6-201ENST00000573168 2673 ntBASIC20.3■□□□□ 0.84
CPSF7Q8N684 AC003957.1-201ENST00000625108 2673 ntBASIC20.3■□□□□ 0.84
CPSF7Q8N684 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF7Q8N684 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.3■□□□□ 0.84
CPSF7Q8N684 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF7Q8N684 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF7Q8N684 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF7Q8N684 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF7Q8N684 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CPSF7Q8N684 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.29■□□□□ 0.84
CPSF7Q8N684 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF7Q8N684 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.29■□□□□ 0.84
CPSF7Q8N684 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CPSF7Q8N684 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.29■□□□□ 0.84
CPSF7Q8N684 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CPSF7Q8N684 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF7Q8N684 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.29■□□□□ 0.84
CPSF7Q8N684 AC087623.3-201ENST00000607047 1098 ntBASIC20.29■□□□□ 0.84
CPSF7Q8N684 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CPSF7Q8N684 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF7Q8N684 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CPSF7Q8N684 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms