Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC29.56■■■□□ 2.32
LTBP4Q8N2S1 AC006011.2-201ENST00000621313 1158 ntBASIC29.56■■■□□ 2.32
LTBP4Q8N2S1 AC061975.6-201ENST00000579045 1553 ntBASIC29.56■■■□□ 2.32
LTBP4Q8N2S1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC29.56■■■□□ 2.32
LTBP4Q8N2S1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LTBP4Q8N2S1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
LTBP4Q8N2S1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
LTBP4Q8N2S1 AL358472.4-201ENST00000633140 710 ntBASIC29.56■■■□□ 2.32
LTBP4Q8N2S1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
LTBP4Q8N2S1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC29.55■■■□□ 2.32
LTBP4Q8N2S1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
LTBP4Q8N2S1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
LTBP4Q8N2S1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
LTBP4Q8N2S1 KRT18P68-201ENST00000392293 1000 ntBASIC29.55■■■□□ 2.32
LTBP4Q8N2S1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
LTBP4Q8N2S1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
LTBP4Q8N2S1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC29.55■■■□□ 2.32
LTBP4Q8N2S1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
LTBP4Q8N2S1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC29.54■■■□□ 2.32
LTBP4Q8N2S1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
LTBP4Q8N2S1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC29.54■■■□□ 2.32
LTBP4Q8N2S1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
LTBP4Q8N2S1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC29.54■■■□□ 2.32
LTBP4Q8N2S1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC29.54■■■□□ 2.32
LTBP4Q8N2S1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
LTBP4Q8N2S1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
LTBP4Q8N2S1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.54■■■□□ 2.32
LTBP4Q8N2S1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
LTBP4Q8N2S1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
LTBP4Q8N2S1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
LTBP4Q8N2S1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
LTBP4Q8N2S1 AL137013.1-201ENST00000432946 1228 ntBASIC29.53■■■□□ 2.32
LTBP4Q8N2S1 KRT18P48-201ENST00000434763 852 ntBASIC29.53■■■□□ 2.32
LTBP4Q8N2S1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC29.53■■■□□ 2.32
LTBP4Q8N2S1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
LTBP4Q8N2S1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC29.53■■■□□ 2.32
LTBP4Q8N2S1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
LTBP4Q8N2S1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
LTBP4Q8N2S1 AP000525.1-201ENST00000608286 694 ntBASIC29.53■■■□□ 2.32
LTBP4Q8N2S1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
LTBP4Q8N2S1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC29.52■■■□□ 2.32
LTBP4Q8N2S1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC29.52■■■□□ 2.32
LTBP4Q8N2S1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC29.51■■■□□ 2.32
LTBP4Q8N2S1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
LTBP4Q8N2S1 AC145676.1-201ENST00000514988 2004 ntBASIC29.51■■■□□ 2.32
LTBP4Q8N2S1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC29.51■■■□□ 2.31
LTBP4Q8N2S1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
LTBP4Q8N2S1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC29.51■■■□□ 2.31
LTBP4Q8N2S1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
LTBP4Q8N2S1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC29.51■■■□□ 2.31
LTBP4Q8N2S1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
LTBP4Q8N2S1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
LTBP4Q8N2S1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
LTBP4Q8N2S1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
LTBP4Q8N2S1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC29.5■■■□□ 2.31
LTBP4Q8N2S1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC29.5■■■□□ 2.31
LTBP4Q8N2S1 AF186192.3-201ENST00000583427 947 ntBASIC29.5■■■□□ 2.31
LTBP4Q8N2S1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
LTBP4Q8N2S1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
LTBP4Q8N2S1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
LTBP4Q8N2S1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC29.49■■■□□ 2.31
LTBP4Q8N2S1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
LTBP4Q8N2S1 AC120498.8-201ENST00000614275 531 ntBASIC29.49■■■□□ 2.31
LTBP4Q8N2S1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
LTBP4Q8N2S1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
LTBP4Q8N2S1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
LTBP4Q8N2S1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
LTBP4Q8N2S1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC29.49■■■□□ 2.31
LTBP4Q8N2S1 HES2-206ENST00000489730 730 ntTSL 2 BASIC29.49■■■□□ 2.31
LTBP4Q8N2S1 AC091076.1-201ENST00000610741 619 ntBASIC29.49■■■□□ 2.31
LTBP4Q8N2S1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
LTBP4Q8N2S1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC29.48■■■□□ 2.31
LTBP4Q8N2S1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
LTBP4Q8N2S1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
LTBP4Q8N2S1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
LTBP4Q8N2S1 CYP2D8P-201ENST00000433633 1490 ntBASIC29.48■■■□□ 2.31
LTBP4Q8N2S1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC29.48■■■□□ 2.31
LTBP4Q8N2S1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
LTBP4Q8N2S1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
LTBP4Q8N2S1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC29.47■■■□□ 2.31
LTBP4Q8N2S1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
LTBP4Q8N2S1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
LTBP4Q8N2S1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC29.47■■■□□ 2.31
LTBP4Q8N2S1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC29.47■■■□□ 2.31
LTBP4Q8N2S1 AC105020.6-201ENST00000621523 1217 ntBASIC29.47■■■□□ 2.31
LTBP4Q8N2S1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC29.47■■■□□ 2.31
LTBP4Q8N2S1 AC010947.1-201ENST00000623454 693 ntBASIC29.47■■■□□ 2.31
LTBP4Q8N2S1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
LTBP4Q8N2S1 AP003733.4-201ENST00000623785 1697 ntBASIC29.47■■■□□ 2.31
LTBP4Q8N2S1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
LTBP4Q8N2S1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC29.46■■■□□ 2.31
LTBP4Q8N2S1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
LTBP4Q8N2S1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
LTBP4Q8N2S1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.46■■■□□ 2.31
LTBP4Q8N2S1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC29.46■■■□□ 2.31
LTBP4Q8N2S1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
LTBP4Q8N2S1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC29.46■■■□□ 2.31
LTBP4Q8N2S1 CDV3P1-201ENST00000471403 739 ntBASIC29.46■■■□□ 2.31
LTBP4Q8N2S1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC29.46■■■□□ 2.31
LTBP4Q8N2S1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC29.46■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms