Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 MIR4497-201ENST00000583208 89 ntBASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 AC087633.2-202ENST00000565166 1439 ntBASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
COL27A1Q8IZC6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 SOX15-203ENST00000570788 1093 ntBASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 POM121L13P-201ENST00000422362 380 ntBASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.84■□□□□ 0.77
COL27A1Q8IZC6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL27A1Q8IZC6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL27A1Q8IZC6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL27A1Q8IZC6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL27A1Q8IZC6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.83■□□□□ 0.77
COL27A1Q8IZC6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL27A1Q8IZC6 CYP21A1P-202ENST00000354927 1481 ntBASIC19.83■□□□□ 0.77
COL27A1Q8IZC6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL27A1Q8IZC6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL27A1Q8IZC6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.83■□□□□ 0.77
COL27A1Q8IZC6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL27A1Q8IZC6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL27A1Q8IZC6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL27A1Q8IZC6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 AL589743.5-201ENST00000616611 1050 ntBASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 AC012618.2-201ENST00000428058 849 ntBASIC19.82■□□□□ 0.76
COL27A1Q8IZC6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 KRT17P3-201ENST00000420566 1262 ntBASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.81■□□□□ 0.76
COL27A1Q8IZC6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.8■□□□□ 0.76
COL27A1Q8IZC6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL27A1Q8IZC6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL27A1Q8IZC6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL27A1Q8IZC6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.8■□□□□ 0.76
COL27A1Q8IZC6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms