Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CPNE9Q8IYJ1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CPNE9Q8IYJ1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE9Q8IYJ1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.58■□□□□ 0.88
CPNE9Q8IYJ1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE9Q8IYJ1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE9Q8IYJ1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.58■□□□□ 0.88
CPNE9Q8IYJ1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CPNE9Q8IYJ1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE9Q8IYJ1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.57■□□□□ 0.88
CPNE9Q8IYJ1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.57■□□□□ 0.88
CPNE9Q8IYJ1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.57■□□□□ 0.88
CPNE9Q8IYJ1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.57■□□□□ 0.88
CPNE9Q8IYJ1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CPNE9Q8IYJ1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.57■□□□□ 0.88
CPNE9Q8IYJ1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.57■□□□□ 0.88
CPNE9Q8IYJ1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.57■□□□□ 0.88
CPNE9Q8IYJ1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CPNE9Q8IYJ1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.57■□□□□ 0.88
CPNE9Q8IYJ1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE9Q8IYJ1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 AC138907.5-202ENST00000569484 235 ntBASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 AC104187.1-201ENST00000607510 612 ntBASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 AC092667.1-201ENST00000434301 2586 ntBASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 AP004607.4-201ENST00000530158 1459 ntBASIC20.56■□□□□ 0.88
CPNE9Q8IYJ1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 AC008175.2-201ENST00000612840 297 ntBASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.55■□□□□ 0.88
CPNE9Q8IYJ1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE9Q8IYJ1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 AC010141.2-201ENST00000452426 721 ntBASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms