Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 AC010141.3-201ENST00000456659 717 ntBASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 AC091305.1-201ENST00000479476 895 ntBASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CRLF3Q8IUI8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 AC105265.2-201ENST00000467189 838 ntBASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.73■□□□□ 0.91
CRLF3Q8IUI8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 AC008764.7-201ENST00000593779 1081 ntBASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 AC073314.1-201ENST00000568729 2216 ntBASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CRLF3Q8IUI8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 AC027682.1-201ENST00000562846 899 ntBASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CRLF3Q8IUI8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.7■□□□□ 0.91
CRLF3Q8IUI8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms