Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF550Q7Z398 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF550Q7Z398 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF550Q7Z398 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF550Q7Z398 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF550Q7Z398 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF550Q7Z398 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.16■□□□□ 0.66
ZNF550Q7Z398 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 TERF1P2-201ENST00000583350 1212 ntBASIC19.16■□□□□ 0.66
ZNF550Q7Z398 AC008175.2-201ENST00000612840 297 ntBASIC19.16■□□□□ 0.66
ZNF550Q7Z398 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
ZNF550Q7Z398 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 NTF6G-201ENST00000591094 616 ntBASIC19.15■□□□□ 0.66
ZNF550Q7Z398 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 AP004607.4-201ENST00000530158 1459 ntBASIC19.15■□□□□ 0.66
ZNF550Q7Z398 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF550Q7Z398 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 POU5F1P4-201ENST00000413175 1085 ntBASIC19.14■□□□□ 0.65
ZNF550Q7Z398 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF550Q7Z398 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 AL137784.2-201ENST00000607332 1000 ntBASIC19.13■□□□□ 0.65
ZNF550Q7Z398 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF550Q7Z398 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 AC092437.1-201ENST00000624794 1048 ntBASIC19.12■□□□□ 0.65
ZNF550Q7Z398 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF550Q7Z398 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ZNF550Q7Z398 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF550Q7Z398 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF550Q7Z398 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF550Q7Z398 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF550Q7Z398 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF550Q7Z398 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ZNF550Q7Z398 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms