Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCHD4Q6ZW05 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PTCHD4Q6ZW05 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PTCHD4Q6ZW05 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCHD4Q6ZW05 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCHD4Q6ZW05 AC073314.1-201ENST00000568729 2216 ntBASIC19.12■□□□□ 0.65
PTCHD4Q6ZW05 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.12■□□□□ 0.65
PTCHD4Q6ZW05 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCHD4Q6ZW05 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCHD4Q6ZW05 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCHD4Q6ZW05 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCHD4Q6ZW05 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PTCHD4Q6ZW05 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCHD4Q6ZW05 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCHD4Q6ZW05 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCHD4Q6ZW05 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 AP004607.7-201ENST00000527152 1677 ntBASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 AC007952.6-201ENST00000573168 2673 ntBASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 AC003957.1-201ENST00000625108 2673 ntBASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCHD4Q6ZW05 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTCHD4Q6ZW05 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.08■□□□□ 0.65
PTCHD4Q6ZW05 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTCHD4Q6ZW05 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTCHD4Q6ZW05 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.08■□□□□ 0.65
PTCHD4Q6ZW05 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTCHD4Q6ZW05 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
PTCHD4Q6ZW05 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PTCHD4Q6ZW05 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PTCHD4Q6ZW05 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.08■□□□□ 0.65
PTCHD4Q6ZW05 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
PTCHD4Q6ZW05 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCHD4Q6ZW05 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.08■□□□□ 0.64
PTCHD4Q6ZW05 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCHD4Q6ZW05 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCHD4Q6ZW05 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTCHD4Q6ZW05 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCHD4Q6ZW05 PLK5-205ENST00000642079 1969 ntBASIC19.08■□□□□ 0.64
PTCHD4Q6ZW05 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.08■□□□□ 0.64
PTCHD4Q6ZW05 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCHD4Q6ZW05 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTCHD4Q6ZW05 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCHD4Q6ZW05 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
PTCHD4Q6ZW05 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 AL391422.3-201ENST00000603791 2761 ntBASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms