Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
TRIM60Q495X7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.04■■□□□ 1.28
TRIM60Q495X7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TRIM60Q495X7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TRIM60Q495X7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.04■■□□□ 1.28
TRIM60Q495X7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM60Q495X7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM60Q495X7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM60Q495X7 AC139530.1-201ENST00000575312 1977 ntBASIC23.03■■□□□ 1.28
TRIM60Q495X7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
TRIM60Q495X7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
TRIM60Q495X7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM60Q495X7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM60Q495X7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM60Q495X7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.03■■□□□ 1.28
TRIM60Q495X7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM60Q495X7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM60Q495X7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.03■■□□□ 1.28
TRIM60Q495X7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.03■■□□□ 1.28
TRIM60Q495X7 AC133561.5-201ENST00000635547 218 ntBASIC23.03■■□□□ 1.28
TRIM60Q495X7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM60Q495X7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.03■■□□□ 1.28
TRIM60Q495X7 KRT17P2-201ENST00000300992 1314 ntBASIC23.03■■□□□ 1.28
TRIM60Q495X7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM60Q495X7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM60Q495X7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM60Q495X7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM60Q495X7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.02■■□□□ 1.28
TRIM60Q495X7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM60Q495X7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM60Q495X7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM60Q495X7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.02■■□□□ 1.28
TRIM60Q495X7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM60Q495X7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.02■■□□□ 1.28
TRIM60Q495X7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.02■■□□□ 1.28
TRIM60Q495X7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.02■■□□□ 1.28
TRIM60Q495X7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.02■■□□□ 1.28
TRIM60Q495X7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.02■■□□□ 1.28
TRIM60Q495X7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM60Q495X7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM60Q495X7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
TRIM60Q495X7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TRIM60Q495X7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.01■■□□□ 1.27
TRIM60Q495X7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.01■■□□□ 1.27
TRIM60Q495X7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM60Q495X7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM60Q495X7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
TRIM60Q495X7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM60Q495X7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM60Q495X7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.01■■□□□ 1.27
TRIM60Q495X7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM60Q495X7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.01■■□□□ 1.27
TRIM60Q495X7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TRIM60Q495X7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM60Q495X7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
TRIM60Q495X7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23■■□□□ 1.27
TRIM60Q495X7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23■■□□□ 1.27
TRIM60Q495X7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23■■□□□ 1.27
TRIM60Q495X7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23■■□□□ 1.27
TRIM60Q495X7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23■■□□□ 1.27
TRIM60Q495X7 HES2-205ENST00000487437 968 ntTSL 3 BASIC23■■□□□ 1.27
TRIM60Q495X7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23■■□□□ 1.27
TRIM60Q495X7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23■■□□□ 1.27
TRIM60Q495X7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TRIM60Q495X7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23■■□□□ 1.27
TRIM60Q495X7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23■■□□□ 1.27
TRIM60Q495X7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23■■□□□ 1.27
TRIM60Q495X7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23■■□□□ 1.27
TRIM60Q495X7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23■■□□□ 1.27
TRIM60Q495X7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM60Q495X7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM60Q495X7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM60Q495X7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM60Q495X7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms