Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CACNA1EQ15878 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1EQ15878 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.44■□□□□ 0.86
CACNA1EQ15878 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1EQ15878 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.44■□□□□ 0.86
CACNA1EQ15878 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1EQ15878 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.44■□□□□ 0.86
CACNA1EQ15878 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CACNA1EQ15878 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1EQ15878 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CACNA1EQ15878 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CACNA1EQ15878 SNORA78-201ENST00000459373 127 ntBASIC20.44■□□□□ 0.86
CACNA1EQ15878 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CACNA1EQ15878 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CACNA1EQ15878 FAM197Y4-202ENST00000622692 608 ntBASIC20.44■□□□□ 0.86
CACNA1EQ15878 AC026471.6-201ENST00000622954 1905 ntBASIC20.44■□□□□ 0.86
CACNA1EQ15878 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1EQ15878 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1EQ15878 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CACNA1EQ15878 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.44■□□□□ 0.86
CACNA1EQ15878 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.43■□□□□ 0.86
CACNA1EQ15878 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.43■□□□□ 0.86
CACNA1EQ15878 AC010542.4-201ENST00000563151 1910 ntBASIC20.43■□□□□ 0.86
CACNA1EQ15878 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1EQ15878 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.43■□□□□ 0.86
CACNA1EQ15878 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.43■□□□□ 0.86
CACNA1EQ15878 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1EQ15878 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.43■□□□□ 0.86
CACNA1EQ15878 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.43■□□□□ 0.86
CACNA1EQ15878 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.43■□□□□ 0.86
CACNA1EQ15878 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1EQ15878 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.43■□□□□ 0.86
CACNA1EQ15878 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.43■□□□□ 0.86
CACNA1EQ15878 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.43■□□□□ 0.86
CACNA1EQ15878 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1EQ15878 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1EQ15878 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1EQ15878 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1EQ15878 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1EQ15878 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1EQ15878 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.43■□□□□ 0.86
CACNA1EQ15878 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.43■□□□□ 0.86
CACNA1EQ15878 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.43■□□□□ 0.86
CACNA1EQ15878 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1EQ15878 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CACNA1EQ15878 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CACNA1EQ15878 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1EQ15878 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.42■□□□□ 0.86
CACNA1EQ15878 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.42■□□□□ 0.86
CACNA1EQ15878 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.42■□□□□ 0.86
CACNA1EQ15878 LINC01023-201ENST00000606054 436 ntBASIC20.42■□□□□ 0.86
CACNA1EQ15878 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1EQ15878 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CACNA1EQ15878 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1EQ15878 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1EQ15878 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1EQ15878 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.42■□□□□ 0.86
CACNA1EQ15878 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.42■□□□□ 0.86
CACNA1EQ15878 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.42■□□□□ 0.86
CACNA1EQ15878 AC010331.1-201ENST00000611423 582 ntBASIC20.42■□□□□ 0.86
CACNA1EQ15878 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1EQ15878 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1EQ15878 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CACNA1EQ15878 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CACNA1EQ15878 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1EQ15878 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.41■□□□□ 0.86
CACNA1EQ15878 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.41■□□□□ 0.86
CACNA1EQ15878 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.41■□□□□ 0.86
CACNA1EQ15878 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1EQ15878 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.41■□□□□ 0.86
CACNA1EQ15878 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1EQ15878 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1EQ15878 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.41■□□□□ 0.86
CACNA1EQ15878 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CACNA1EQ15878 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
CACNA1EQ15878 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1EQ15878 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.41■□□□□ 0.86
CACNA1EQ15878 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1EQ15878 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1EQ15878 SOX15-203ENST00000570788 1093 ntBASIC20.41■□□□□ 0.86
CACNA1EQ15878 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
CACNA1EQ15878 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.41■□□□□ 0.86
CACNA1EQ15878 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1EQ15878 AC092368.3-202ENST00000574180 1591 ntBASIC20.4■□□□□ 0.86
CACNA1EQ15878 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1EQ15878 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1EQ15878 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1EQ15878 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1EQ15878 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1EQ15878 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.4■□□□□ 0.86
CACNA1EQ15878 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1EQ15878 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
CACNA1EQ15878 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1EQ15878 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1EQ15878 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.4■□□□□ 0.86
CACNA1EQ15878 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CACNA1EQ15878 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.39■□□□□ 0.86
CACNA1EQ15878 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CACNA1EQ15878 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CACNA1EQ15878 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms