Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL20P78556 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.44■□□□□ 0.22
CCL20P78556 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL20P78556 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL20P78556 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL20P78556 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CCL20P78556 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL20P78556 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL20P78556 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL20P78556 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL20P78556 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL20P78556 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.43■□□□□ 0.22
CCL20P78556 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL20P78556 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.43■□□□□ 0.22
CCL20P78556 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL20P78556 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL20P78556 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL20P78556 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.43■□□□□ 0.22
CCL20P78556 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.43■□□□□ 0.22
CCL20P78556 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.43■□□□□ 0.22
CCL20P78556 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCL20P78556 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
CCL20P78556 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.42■□□□□ 0.22
CCL20P78556 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL20P78556 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCL20P78556 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL20P78556 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CCL20P78556 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL20P78556 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCL20P78556 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CCL20P78556 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCL20P78556 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.42■□□□□ 0.22
CCL20P78556 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL20P78556 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.42■□□□□ 0.22
CCL20P78556 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.42■□□□□ 0.22
CCL20P78556 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCL20P78556 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CCL20P78556 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL20P78556 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCL20P78556 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL20P78556 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCL20P78556 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL20P78556 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCL20P78556 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCL20P78556 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.42■□□□□ 0.22
CCL20P78556 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.42■□□□□ 0.22
CCL20P78556 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.42■□□□□ 0.22
CCL20P78556 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.42■□□□□ 0.22
CCL20P78556 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL20P78556 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL20P78556 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL20P78556 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCL20P78556 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL20P78556 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.41■□□□□ 0.22
CCL20P78556 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.41■□□□□ 0.22
CCL20P78556 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.41■□□□□ 0.22
CCL20P78556 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.41■□□□□ 0.22
CCL20P78556 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CCL20P78556 AC121338.2-201ENST00000622535 1744 ntBASIC16.41■□□□□ 0.22
CCL20P78556 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL20P78556 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL20P78556 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL20P78556 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL20P78556 AC003102.1-202ENST00000563394 1796 ntBASIC16.41■□□□□ 0.22
CCL20P78556 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL20P78556 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.41■□□□□ 0.22
CCL20P78556 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCL20P78556 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCL20P78556 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CCL20P78556 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCL20P78556 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCL20P78556 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCL20P78556 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCL20P78556 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCL20P78556 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.4■□□□□ 0.22
CCL20P78556 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.4■□□□□ 0.22
CCL20P78556 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCL20P78556 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCL20P78556 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CCL20P78556 AC005703.6-201ENST00000623265 1329 ntBASIC16.4■□□□□ 0.22
CCL20P78556 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCL20P78556 LETM1P2-201ENST00000597330 2178 ntBASIC16.4■□□□□ 0.22
CCL20P78556 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCL20P78556 AL158211.5-201ENST00000623583 2518 ntBASIC16.4■□□□□ 0.22
CCL20P78556 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCL20P78556 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL20P78556 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL20P78556 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL20P78556 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL20P78556 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL20P78556 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL20P78556 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL20P78556 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.39■□□□□ 0.21
CCL20P78556 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCL20P78556 AL031602.1-201ENST00000633169 911 ntBASIC16.39■□□□□ 0.21
CCL20P78556 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CCL20P78556 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL20P78556 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CCL20P78556 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.39■□□□□ 0.21
CCL20P78556 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms