Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SEC61A1P61619 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEC61A1P61619 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.14■□□□□ 0.49
SEC61A1P61619 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.14■□□□□ 0.49
SEC61A1P61619 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.13■□□□□ 0.49
SEC61A1P61619 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEC61A1P61619 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
SEC61A1P61619 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEC61A1P61619 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEC61A1P61619 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.13■□□□□ 0.49
SEC61A1P61619 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.13■□□□□ 0.49
SEC61A1P61619 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.13■□□□□ 0.49
SEC61A1P61619 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SEC61A1P61619 AC010141.3-201ENST00000456659 717 ntBASIC18.13■□□□□ 0.49
SEC61A1P61619 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.13■□□□□ 0.49
SEC61A1P61619 AC087239.1-201ENST00000622671 572 ntBASIC18.13■□□□□ 0.49
SEC61A1P61619 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.13■□□□□ 0.49
SEC61A1P61619 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEC61A1P61619 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.13■□□□□ 0.49
SEC61A1P61619 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.13■□□□□ 0.49
SEC61A1P61619 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.13■□□□□ 0.49
SEC61A1P61619 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEC61A1P61619 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SEC61A1P61619 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SEC61A1P61619 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SEC61A1P61619 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SEC61A1P61619 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SEC61A1P61619 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.12■□□□□ 0.49
SEC61A1P61619 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SEC61A1P61619 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
SEC61A1P61619 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.12■□□□□ 0.49
SEC61A1P61619 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.12■□□□□ 0.49
SEC61A1P61619 AC092666.2-201ENST00000613287 246 ntBASIC18.12■□□□□ 0.49
SEC61A1P61619 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SEC61A1P61619 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.12■□□□□ 0.49
SEC61A1P61619 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SEC61A1P61619 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.12■□□□□ 0.49
SEC61A1P61619 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.12■□□□□ 0.49
SEC61A1P61619 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SEC61A1P61619 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SEC61A1P61619 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SEC61A1P61619 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.11■□□□□ 0.49
SEC61A1P61619 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SEC61A1P61619 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SEC61A1P61619 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SEC61A1P61619 DUX4L2-201ENST00000561772 1275 ntBASIC18.11■□□□□ 0.49
SEC61A1P61619 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
SEC61A1P61619 DUX4L6-201ENST00000626483 1275 ntBASIC18.11■□□□□ 0.49
SEC61A1P61619 DUX4L1-201ENST00000627662 1275 ntBASIC18.11■□□□□ 0.49
SEC61A1P61619 DUX4L8-201ENST00000629013 1275 ntBASIC18.11■□□□□ 0.49
SEC61A1P61619 DUX4L3-201ENST00000630187 1275 ntBASIC18.11■□□□□ 0.49
SEC61A1P61619 DUX4L7-201ENST00000630678 1275 ntBASIC18.11■□□□□ 0.49
SEC61A1P61619 DUX4L5-201ENST00000630834 1275 ntBASIC18.11■□□□□ 0.49
SEC61A1P61619 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.11■□□□□ 0.49
SEC61A1P61619 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.11■□□□□ 0.49
SEC61A1P61619 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SEC61A1P61619 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SEC61A1P61619 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.11■□□□□ 0.49
SEC61A1P61619 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.11■□□□□ 0.49
SEC61A1P61619 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SEC61A1P61619 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEC61A1P61619 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SEC61A1P61619 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SEC61A1P61619 FEM1AP4-201ENST00000443167 1987 ntBASIC18.1■□□□□ 0.49
SEC61A1P61619 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEC61A1P61619 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEC61A1P61619 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SEC61A1P61619 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEC61A1P61619 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.1■□□□□ 0.49
SEC61A1P61619 CCDC92B-201ENST00000575506 885 ntBASIC18.1■□□□□ 0.49
SEC61A1P61619 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SEC61A1P61619 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.1■□□□□ 0.49
SEC61A1P61619 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEC61A1P61619 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SEC61A1P61619 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
SEC61A1P61619 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.1■□□□□ 0.49
SEC61A1P61619 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.1■□□□□ 0.49
SEC61A1P61619 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.1■□□□□ 0.49
SEC61A1P61619 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SEC61A1P61619 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SEC61A1P61619 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SEC61A1P61619 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms