Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLDN2P57739 AL355472.2-201ENST00000422958 438 ntBASIC20.64■□□□□ 0.89
CLDN2P57739 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.64■□□□□ 0.89
CLDN2P57739 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.64■□□□□ 0.89
CLDN2P57739 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.64■□□□□ 0.89
CLDN2P57739 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDN2P57739 AC083880.1-201ENST00000608266 535 ntBASIC20.64■□□□□ 0.89
CLDN2P57739 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN2P57739 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN2P57739 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN2P57739 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN2P57739 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CLDN2P57739 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN2P57739 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLDN2P57739 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN2P57739 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CLDN2P57739 FAM201B-201ENST00000458407 597 ntBASIC20.63■□□□□ 0.89
CLDN2P57739 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.63■□□□□ 0.89
CLDN2P57739 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.63■□□□□ 0.89
CLDN2P57739 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CLDN2P57739 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN2P57739 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN2P57739 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN2P57739 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN2P57739 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CLDN2P57739 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN2P57739 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLDN2P57739 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN2P57739 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN2P57739 DUSP5P2-201ENST00000426873 1033 ntBASIC20.62■□□□□ 0.89
CLDN2P57739 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLDN2P57739 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.62■□□□□ 0.89
CLDN2P57739 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.62■□□□□ 0.89
CLDN2P57739 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN2P57739 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.62■□□□□ 0.89
CLDN2P57739 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN2P57739 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN2P57739 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN2P57739 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN2P57739 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN2P57739 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN2P57739 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.61■□□□□ 0.89
CLDN2P57739 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN2P57739 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDN2P57739 AC097658.1-201ENST00000475555 843 ntBASIC20.61■□□□□ 0.89
CLDN2P57739 AC091874.3-201ENST00000512672 1195 ntBASIC20.61■□□□□ 0.89
CLDN2P57739 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN2P57739 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDN2P57739 MYC-209ENST00000641252 345 ntBASIC20.61■□□□□ 0.89
CLDN2P57739 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN2P57739 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN2P57739 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CLDN2P57739 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN2P57739 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN2P57739 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN2P57739 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN2P57739 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.6■□□□□ 0.89
CLDN2P57739 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN2P57739 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN2P57739 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN2P57739 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN2P57739 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN2P57739 CDV3P1-201ENST00000471403 739 ntBASIC20.6■□□□□ 0.89
CLDN2P57739 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.6■□□□□ 0.89
CLDN2P57739 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.6■□□□□ 0.89
CLDN2P57739 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN2P57739 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN2P57739 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLDN2P57739 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN2P57739 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN2P57739 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN2P57739 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
CLDN2P57739 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN2P57739 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN2P57739 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN2P57739 KRT17P1-201ENST00000399211 1546 ntBASIC20.59■□□□□ 0.89
CLDN2P57739 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN2P57739 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN2P57739 LSM12P1-201ENST00000411836 588 ntBASIC20.59■□□□□ 0.89
CLDN2P57739 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.59■□□□□ 0.89
CLDN2P57739 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
CLDN2P57739 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.59■□□□□ 0.89
CLDN2P57739 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN2P57739 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN2P57739 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.59■□□□□ 0.89
CLDN2P57739 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CLDN2P57739 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.59■□□□□ 0.89
CLDN2P57739 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN2P57739 FAM21FP-204ENST00000608637 956 ntBASIC20.59■□□□□ 0.89
CLDN2P57739 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN2P57739 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN2P57739 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN2P57739 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN2P57739 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CLDN2P57739 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.59■□□□□ 0.89
CLDN2P57739 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN2P57739 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN2P57739 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN2P57739 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN2P57739 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms