Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 ATG27YJL178C 816 nt2.26□□□□□ -2.05
SSU72P53538 TDA8YAL064C-A 381 nt2.26□□□□□ -2.05
SSU72P53538 APC9YLR102C 798 nt2.26□□□□□ -2.05
SSU72P53538 SMD3YLR147C 306 nt2.26□□□□□ -2.05
SSU72P53538 YLR339CYLR339C 552 nt2.26□□□□□ -2.05
SSU72P53538 MRPL17YNL252C 846 nt2.26□□□□□ -2.05
SSU72P53538 YOL134CYOL134C 390 nt2.26□□□□□ -2.05
SSU72P53538 DAD3YBR233W-A 285 nt2.26□□□□□ -2.05
SSU72P53538 MRD1YPR112C 2664 nt2.25□□□□□ -2.05
SSU72P53538 NEW1YPL226W 3591 nt2.25□□□□□ -2.05
SSU72P53538 YDL157CYDL157C 357 nt2.25□□□□□ -2.05
SSU72P53538 SRB7YDR308C 423 nt2.25□□□□□ -2.05
SSU72P53538 TIM9YEL020W-A 264 nt2.25□□□□□ -2.05
SSU72P53538 YGL242CYGL242C 546 nt2.25□□□□□ -2.05
SSU72P53538 ERG25YGR060W 930 nt2.25□□□□□ -2.05
SSU72P53538 YHR180W-AYHR180W-A 183 nt2.25□□□□□ -2.05
SSU72P53538 NNF1YJR112W 606 nt2.25□□□□□ -2.05
SSU72P53538 YKR070WYKR070W 1059 nt2.25□□□□□ -2.05
SSU72P53538 SUB1YMR039C 879 nt2.25□□□□□ -2.05
SSU72P53538 YMR316C-AYMR316C-A 312 nt2.25□□□□□ -2.05
SSU72P53538 MSN1YOL116W 1149 nt2.25□□□□□ -2.05
SSU72P53538 YOR097CYOR097C 528 nt2.25□□□□□ -2.05
SSU72P53538 YBR259WYBR259W 2067 nt2.25□□□□□ -2.05
SSU72P53538 HBT1YDL223C 3141 nt2.25□□□□□ -2.05
SSU72P53538 SPF1YEL031W 3648 nt2.25□□□□□ -2.05
SSU72P53538 YDR186CYDR186C 2634 nt2.24□□□□□ -2.05
SSU72P53538 SPT14YPL175W 1359 nt2.24□□□□□ -2.05
SSU72P53538 YCR045W-AYCR045W-A 351 nt2.24□□□□□ -2.05
SSU72P53538 AI3Q0060 1248 nt2.24□□□□□ -2.05
SSU72P53538 tR(UCU)Q1tR(UCU)Q1 73 nt2.24□□□□□ -2.05
SSU72P53538 RNR2YJL026W 1200 nt2.24□□□□□ -2.05
SSU72P53538 YLR012CYLR012C 300 nt2.24□□□□□ -2.05
SSU72P53538 RIM9YMR063W 720 nt2.24□□□□□ -2.05
SSU72P53538 SRT1YMR101C 1032 nt2.24□□□□□ -2.05
SSU72P53538 JID1YPR061C 906 nt2.24□□□□□ -2.05
SSU72P53538 DPB3YBR278W 606 nt2.24□□□□□ -2.05
SSU72P53538 PEX34YCL056C 435 nt2.24□□□□□ -2.05
SSU72P53538 KEL2YGR238C 2649 nt2.24□□□□□ -2.05
SSU72P53538 SPB1YCL054W 2526 nt2.24□□□□□ -2.05
SSU72P53538 APC5YOR249C 2058 nt2.24□□□□□ -2.05
SSU72P53538 AVT5YBL089W 1380 nt2.23□□□□□ -2.05
SSU72P53538 YCR100CYCR100C 951 nt2.23□□□□□ -2.05
SSU72P53538 RUB1YDR139C 234 nt2.23□□□□□ -2.05
SSU72P53538 COBQ0105 1158 nt2.23□□□□□ -2.05
SSU72P53538 HMF1YER057C 390 nt2.23□□□□□ -2.05
SSU72P53538 YFR057WYFR057W 456 nt2.23□□□□□ -2.05
SSU72P53538 YAL066WYAL066W 309 nt2.23□□□□□ -2.05
SSU72P53538 YLR366WYLR366W 306 nt2.23□□□□□ -2.05
SSU72P53538 YBL055CYBL055C 1257 nt2.23□□□□□ -2.05
SSU72P53538 YNL046WYNL046W 519 nt2.23□□□□□ -2.05
SSU72P53538 YNL226WYNL226W 411 nt2.23□□□□□ -2.05
SSU72P53538 TPT1YOL102C 693 nt2.23□□□□□ -2.05
SSU72P53538 RPB8YOR224C 441 nt2.23□□□□□ -2.05
SSU72P53538 HAT1YPL001W 1125 nt2.23□□□□□ -2.05
SSU72P53538 AFI1YOR129C 2682 nt2.23□□□□□ -2.05
SSU72P53538 RTT10YPL183C 3042 nt2.23□□□□□ -2.05
SSU72P53538 EDS1YBR033W 2760 nt2.22□□□□□ -2.05
SSU72P53538 SEC26YDR238C 2922 nt2.22□□□□□ -2.05
SSU72P53538 GUK1YDR454C 564 nt2.22□□□□□ -2.05
SSU72P53538 MFA1YDR461W 111 nt2.22□□□□□ -2.05
SSU72P53538 YGL063C-AYGL063C-A 150 nt2.22□□□□□ -2.05
SSU72P53538 YGL218WYGL218W 651 nt2.22□□□□□ -2.05
SSU72P53538 OST5YGL226C-A 261 nt2.22□□□□□ -2.05
SSU72P53538 YGR050CYGR050C 357 nt2.22□□□□□ -2.05
SSU72P53538 RPL14BYHL001W 417 nt2.22□□□□□ -2.05
SSU72P53538 SVP26YHR181W 687 nt2.22□□□□□ -2.05
SSU72P53538 YIL068W-AYIL068W-A 384 nt2.22□□□□□ -2.05
SSU72P53538 YAL042C-AYAL042C-A 378 nt2.22□□□□□ -2.05
SSU72P53538 YLR169WYLR169W 354 nt2.22□□□□□ -2.05
SSU72P53538 SPC2YML055W 537 nt2.22□□□□□ -2.05
SSU72P53538 YOL106WYOL106W 354 nt2.22□□□□□ -2.05
SSU72P53538 YOR366WYOR366W 354 nt2.22□□□□□ -2.05
SSU72P53538 YBR201C-AYBR201C-A 204 nt2.22□□□□□ -2.05
SSU72P53538 HSE1YHL002W 1359 nt2.22□□□□□ -2.05
SSU72P53538 AXL1YPR122W 3627 nt2.22□□□□□ -2.05
SSU72P53538 YHR078WYHR078W 1659 nt2.22□□□□□ -2.05
SSU72P53538 VAC14YLR386W 2643 nt2.21□□□□□ -2.05
SSU72P53538 ESL2YKR096W 3588 nt2.21□□□□□ -2.05
SSU72P53538 YPR097WYPR097W 3222 nt2.21□□□□□ -2.06
SSU72P53538 BNI1YNL271C 5862 nt2.21□□□□□ -2.06
SSU72P53538 SRO77YBL106C 3033 nt2.21□□□□□ -2.06
SSU72P53538 FRE8YLR047C 2061 nt2.21□□□□□ -2.06
SSU72P53538 snR68snR68 136 nt2.21□□□□□ -2.06
SSU72P53538 YGL230CYGL230C 444 nt2.21□□□□□ -2.06
SSU72P53538 UPF3YGR072W 1164 nt2.21□□□□□ -2.06
SSU72P53538 NOP19YGR251W 591 nt2.21□□□□□ -2.06
SSU72P53538 YPK1YKL126W 2043 nt2.21□□□□□ -2.06
SSU72P53538 SFG1YOR315W 1041 nt2.21□□□□□ -2.06
SSU72P53538 YPL135C-AYPL135C-A 174 nt2.21□□□□□ -2.06
SSU72P53538 CUP9YPL177C 921 nt2.21□□□□□ -2.06
SSU72P53538 LTP1YPR073C 486 nt2.21□□□□□ -2.06
SSU72P53538 ROY1YMR258C 1662 nt2.21□□□□□ -2.06
SSU72P53538 MLH1YMR167W 2310 nt2.2□□□□□ -2.06
SSU72P53538 YLR108CYLR108C 1458 nt2.2□□□□□ -2.06
SSU72P53538 YNL018CYNL018C 1839 nt2.2□□□□□ -2.06
SSU72P53538 COG7YGL005C 840 nt2.2□□□□□ -2.06
SSU72P53538 MIG2YGL209W 1149 nt2.2□□□□□ -2.06
SSU72P53538 VMA7YGR020C 357 nt2.2□□□□□ -2.06
SSU72P53538 SEC28YIL076W 891 nt2.2□□□□□ -2.06
SSU72P53538 RPS22AYJL190C 393 nt2.2□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 22.8 ms