Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN4P51793 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN4P51793 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN4P51793 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN4P51793 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
CLCN4P51793 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.03■■□□□ 1.12
CLCN4P51793 UNC93B4-201ENST00000505679 747 ntBASIC22.03■■□□□ 1.12
CLCN4P51793 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.03■■□□□ 1.12
CLCN4P51793 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.03■■□□□ 1.12
CLCN4P51793 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN4P51793 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN4P51793 AC060766.5-201ENST00000590539 871 ntBASIC22.03■■□□□ 1.12
CLCN4P51793 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CLCN4P51793 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN4P51793 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.02■■□□□ 1.12
CLCN4P51793 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN4P51793 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.02■■□□□ 1.12
CLCN4P51793 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN4P51793 C11orf96-202ENST00000528572 1834 ntBASIC22.02■■□□□ 1.12
CLCN4P51793 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN4P51793 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN4P51793 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.02■■□□□ 1.12
CLCN4P51793 HLA-B-256ENST00000639848 1089 ntBASIC22.02■■□□□ 1.12
CLCN4P51793 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.02■■□□□ 1.12
CLCN4P51793 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CLCN4P51793 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN4P51793 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.02■■□□□ 1.12
CLCN4P51793 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.02■■□□□ 1.11
CLCN4P51793 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CLCN4P51793 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN4P51793 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN4P51793 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN4P51793 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN4P51793 MCRIP2P1-201ENST00000394346 511 ntBASIC22.01■■□□□ 1.11
CLCN4P51793 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.01■■□□□ 1.11
CLCN4P51793 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.01■■□□□ 1.11
CLCN4P51793 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.01■■□□□ 1.11
CLCN4P51793 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.01■■□□□ 1.11
CLCN4P51793 C1orf229-201ENST00000623686 2258 ntBASIC22.01■■□□□ 1.11
CLCN4P51793 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN4P51793 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.01■■□□□ 1.11
CLCN4P51793 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CLCN4P51793 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN4P51793 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CLCN4P51793 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22■■□□□ 1.11
CLCN4P51793 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN4P51793 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLCN4P51793 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN4P51793 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN4P51793 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN4P51793 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22■■□□□ 1.11
CLCN4P51793 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22■■□□□ 1.11
CLCN4P51793 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22■■□□□ 1.11
CLCN4P51793 AL589743.5-201ENST00000616611 1050 ntBASIC22■■□□□ 1.11
CLCN4P51793 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN4P51793 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CLCN4P51793 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN4P51793 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CLCN4P51793 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN4P51793 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN4P51793 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN4P51793 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.99■■□□□ 1.11
CLCN4P51793 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN4P51793 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN4P51793 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN4P51793 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN4P51793 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN4P51793 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.99■■□□□ 1.11
CLCN4P51793 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN4P51793 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CLCN4P51793 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.98■■□□□ 1.11
CLCN4P51793 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN4P51793 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CLCN4P51793 AC080038.3-201ENST00000623346 1952 ntBASIC21.98■■□□□ 1.11
CLCN4P51793 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.98■■□□□ 1.11
CLCN4P51793 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.98■■□□□ 1.11
CLCN4P51793 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CLCN4P51793 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.98■■□□□ 1.11
CLCN4P51793 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.98■■□□□ 1.11
CLCN4P51793 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN4P51793 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN4P51793 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN4P51793 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.98■■□□□ 1.11
CLCN4P51793 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN4P51793 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.98■■□□□ 1.11
CLCN4P51793 AC010542.4-201ENST00000563151 1910 ntBASIC21.98■■□□□ 1.11
CLCN4P51793 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN4P51793 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN4P51793 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.97■■□□□ 1.11
CLCN4P51793 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN4P51793 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.97■■□□□ 1.11
CLCN4P51793 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN4P51793 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CLCN4P51793 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.97■■□□□ 1.11
CLCN4P51793 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CLCN4P51793 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.97■■□□□ 1.11
CLCN4P51793 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.97■■□□□ 1.11
CLCN4P51793 AL359736.2-201ENST00000621992 437 ntBASIC21.97■■□□□ 1.11
CLCN4P51793 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CLCN4P51793 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms