Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MECP2P51608 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MECP2P51608 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MECP2P51608 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.74■□□□□ 0.43
MECP2P51608 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
MECP2P51608 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.74■□□□□ 0.43
MECP2P51608 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.74■□□□□ 0.43
MECP2P51608 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MECP2P51608 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MECP2P51608 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MECP2P51608 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.74■□□□□ 0.43
MECP2P51608 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MECP2P51608 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MECP2P51608 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
MECP2P51608 AC020907.5-201ENST00000624372 1936 ntBASIC17.74■□□□□ 0.43
MECP2P51608 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MECP2P51608 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MECP2P51608 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MECP2P51608 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MECP2P51608 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
MECP2P51608 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MECP2P51608 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.73■□□□□ 0.43
MECP2P51608 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MECP2P51608 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
MECP2P51608 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MECP2P51608 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.73■□□□□ 0.43
MECP2P51608 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.73■□□□□ 0.43
MECP2P51608 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.73■□□□□ 0.43
MECP2P51608 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MECP2P51608 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MECP2P51608 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MECP2P51608 PLK5-205ENST00000642079 1969 ntBASIC17.73■□□□□ 0.43
MECP2P51608 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MECP2P51608 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MECP2P51608 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MECP2P51608 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MECP2P51608 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MECP2P51608 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MECP2P51608 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MECP2P51608 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MECP2P51608 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MECP2P51608 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MECP2P51608 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.72■□□□□ 0.43
MECP2P51608 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.72■□□□□ 0.43
MECP2P51608 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MECP2P51608 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MECP2P51608 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.72■□□□□ 0.43
MECP2P51608 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.72■□□□□ 0.43
MECP2P51608 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
MECP2P51608 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MECP2P51608 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.72■□□□□ 0.43
MECP2P51608 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MECP2P51608 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.72■□□□□ 0.43
MECP2P51608 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
MECP2P51608 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.72■□□□□ 0.43
MECP2P51608 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MECP2P51608 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.71■□□□□ 0.43
MECP2P51608 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.71■□□□□ 0.43
MECP2P51608 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MECP2P51608 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.71■□□□□ 0.43
MECP2P51608 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MECP2P51608 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MECP2P51608 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
MECP2P51608 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MECP2P51608 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MECP2P51608 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MECP2P51608 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.71■□□□□ 0.43
MECP2P51608 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.71■□□□□ 0.43
MECP2P51608 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MECP2P51608 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MECP2P51608 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.71■□□□□ 0.43
MECP2P51608 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MECP2P51608 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
MECP2P51608 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.71■□□□□ 0.43
MECP2P51608 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
MECP2P51608 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
MECP2P51608 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
MECP2P51608 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
MECP2P51608 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.7■□□□□ 0.42
MECP2P51608 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
MECP2P51608 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
MECP2P51608 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MECP2P51608 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms