Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP9P49458 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SRP9P49458 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP9P49458 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP9P49458 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SRP9P49458 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP9P49458 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP9P49458 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.4■□□□□ 0.54
SRP9P49458 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRP9P49458 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
SRP9P49458 AC105233.4-201ENST00000642045 216 ntBASIC18.4■□□□□ 0.54
SRP9P49458 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
SRP9P49458 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRP9P49458 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP9P49458 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.4■□□□□ 0.54
SRP9P49458 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP9P49458 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRP9P49458 AFG3L1P-217ENST00000557444 2447 ntBASIC18.4■□□□□ 0.54
SRP9P49458 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SRP9P49458 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SRP9P49458 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SRP9P49458 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SRP9P49458 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRP9P49458 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRP9P49458 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRP9P49458 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRP9P49458 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRP9P49458 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.39■□□□□ 0.53
SRP9P49458 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRP9P49458 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRP9P49458 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.39■□□□□ 0.53
SRP9P49458 OR7E47P-201ENST00000546390 1422 ntBASIC18.39■□□□□ 0.53
SRP9P49458 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRP9P49458 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRP9P49458 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SRP9P49458 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SRP9P49458 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SRP9P49458 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.39■□□□□ 0.53
SRP9P49458 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRP9P49458 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
SRP9P49458 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.38■□□□□ 0.53
SRP9P49458 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRP9P49458 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRP9P49458 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRP9P49458 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.38■□□□□ 0.53
SRP9P49458 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.38■□□□□ 0.53
SRP9P49458 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.38■□□□□ 0.53
SRP9P49458 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.38■□□□□ 0.53
SRP9P49458 AL358852.1-201ENST00000623174 1268 ntBASIC18.38■□□□□ 0.53
SRP9P49458 AC026471.6-201ENST00000622954 1905 ntBASIC18.38■□□□□ 0.53
SRP9P49458 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SRP9P49458 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SRP9P49458 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRP9P49458 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.38■□□□□ 0.53
SRP9P49458 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRP9P49458 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRP9P49458 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRP9P49458 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRP9P49458 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRP9P49458 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.38■□□□□ 0.53
SRP9P49458 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.37■□□□□ 0.53
SRP9P49458 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.37■□□□□ 0.53
SRP9P49458 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
SRP9P49458 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRP9P49458 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRP9P49458 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRP9P49458 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.37■□□□□ 0.53
SRP9P49458 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.37■□□□□ 0.53
SRP9P49458 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.37■□□□□ 0.53
SRP9P49458 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.37■□□□□ 0.53
SRP9P49458 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.37■□□□□ 0.53
SRP9P49458 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.37■□□□□ 0.53
SRP9P49458 AL354811.1-201ENST00000610286 706 ntBASIC18.37■□□□□ 0.53
SRP9P49458 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRP9P49458 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRP9P49458 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SRP9P49458 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRP9P49458 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRP9P49458 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SRP9P49458 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SRP9P49458 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.37■□□□□ 0.53
SRP9P49458 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRP9P49458 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SRP9P49458 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SRP9P49458 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRP9P49458 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRP9P49458 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRP9P49458 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRP9P49458 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.36■□□□□ 0.53
SRP9P49458 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SRP9P49458 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRP9P49458 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.36■□□□□ 0.53
SRP9P49458 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.36■□□□□ 0.53
SRP9P49458 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.36■□□□□ 0.53
SRP9P49458 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRP9P49458 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SRP9P49458 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.36■□□□□ 0.53
SRP9P49458 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
SRP9P49458 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SRP9P49458 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms