Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNFP41002 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCNFP41002 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCNFP41002 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNFP41002 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNFP41002 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCNFP41002 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCNFP41002 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.95■□□□□ 0.94
CCNFP41002 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.95■□□□□ 0.94
CCNFP41002 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCNFP41002 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCNFP41002 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.94■□□□□ 0.94
CCNFP41002 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCNFP41002 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCNFP41002 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNFP41002 BX005040.4-201ENST00000637145 1518 ntBASIC20.94■□□□□ 0.94
CCNFP41002 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNFP41002 PLK5-205ENST00000642079 1969 ntBASIC20.94■□□□□ 0.94
CCNFP41002 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNFP41002 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNFP41002 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCNFP41002 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.94■□□□□ 0.94
CCNFP41002 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNFP41002 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.94■□□□□ 0.94
CCNFP41002 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.94■□□□□ 0.94
CCNFP41002 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.94■□□□□ 0.94
CCNFP41002 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.94■□□□□ 0.94
CCNFP41002 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.94■□□□□ 0.94
CCNFP41002 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.94■□□□□ 0.94
CCNFP41002 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.94■□□□□ 0.94
CCNFP41002 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNFP41002 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CCNFP41002 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNFP41002 AC009237.3-201ENST00000393279 1427 ntBASIC20.94■□□□□ 0.94
CCNFP41002 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCNFP41002 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
CCNFP41002 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.94■□□□□ 0.94
CCNFP41002 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCNFP41002 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CCNFP41002 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CCNFP41002 AC073314.1-201ENST00000568729 2216 ntBASIC20.93■□□□□ 0.94
CCNFP41002 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCNFP41002 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCNFP41002 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.93■□□□□ 0.94
CCNFP41002 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.93■□□□□ 0.94
CCNFP41002 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.93■□□□□ 0.94
CCNFP41002 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.93■□□□□ 0.94
CCNFP41002 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.93■□□□□ 0.94
CCNFP41002 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNFP41002 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCNFP41002 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNFP41002 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCNFP41002 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CCNFP41002 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCNFP41002 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CCNFP41002 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.93■□□□□ 0.94
CCNFP41002 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCNFP41002 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.92■□□□□ 0.94
CCNFP41002 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNFP41002 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.92■□□□□ 0.94
CCNFP41002 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNFP41002 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNFP41002 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCNFP41002 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.92■□□□□ 0.94
CCNFP41002 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNFP41002 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNFP41002 ZNRF2P3-201ENST00000424200 374 ntBASIC20.92■□□□□ 0.94
CCNFP41002 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNFP41002 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNFP41002 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.92■□□□□ 0.94
CCNFP41002 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCNFP41002 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CCNFP41002 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.92■□□□□ 0.94
CCNFP41002 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNFP41002 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNFP41002 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNFP41002 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNFP41002 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNFP41002 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCNFP41002 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.91■□□□□ 0.94
CCNFP41002 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCNFP41002 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.91■□□□□ 0.94
CCNFP41002 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNFP41002 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.91■□□□□ 0.94
CCNFP41002 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCNFP41002 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCNFP41002 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCNFP41002 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNFP41002 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.91■□□□□ 0.94
CCNFP41002 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.91■□□□□ 0.94
CCNFP41002 AC019069.1-201ENST00000610008 1333 ntBASIC20.91■□□□□ 0.94
CCNFP41002 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCNFP41002 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCNFP41002 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCNFP41002 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.9■□□□□ 0.94
CCNFP41002 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.9■□□□□ 0.94
CCNFP41002 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNFP41002 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.9■□□□□ 0.94
CCNFP41002 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.9■□□□□ 0.94
CCNFP41002 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms