Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.99■□□□□ 0.31
CEACAM3P40198 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CEACAM3P40198 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CEACAM3P40198 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CEACAM3P40198 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.99■□□□□ 0.31
CEACAM3P40198 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.99■□□□□ 0.31
CEACAM3P40198 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.99■□□□□ 0.31
CEACAM3P40198 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.99■□□□□ 0.31
CEACAM3P40198 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CEACAM3P40198 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CEACAM3P40198 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CEACAM3P40198 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.99■□□□□ 0.31
CEACAM3P40198 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CEACAM3P40198 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CEACAM3P40198 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CEACAM3P40198 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CEACAM3P40198 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.98■□□□□ 0.31
CEACAM3P40198 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CEACAM3P40198 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CEACAM3P40198 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CEACAM3P40198 SLC7A5P1-201ENST00000568957 537 ntBASIC16.98■□□□□ 0.31
CEACAM3P40198 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.98■□□□□ 0.31
CEACAM3P40198 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CEACAM3P40198 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CEACAM3P40198 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.98■□□□□ 0.31
CEACAM3P40198 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CEACAM3P40198 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CEACAM3P40198 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CEACAM3P40198 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.98■□□□□ 0.31
CEACAM3P40198 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CEACAM3P40198 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.98■□□□□ 0.31
CEACAM3P40198 AC061975.6-201ENST00000579045 1553 ntBASIC16.98■□□□□ 0.31
CEACAM3P40198 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.97■□□□□ 0.31
CEACAM3P40198 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CEACAM3P40198 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CEACAM3P40198 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CEACAM3P40198 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CEACAM3P40198 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CEACAM3P40198 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CEACAM3P40198 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.97■□□□□ 0.31
CEACAM3P40198 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CEACAM3P40198 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.97■□□□□ 0.31
CEACAM3P40198 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.97■□□□□ 0.31
CEACAM3P40198 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.97■□□□□ 0.31
CEACAM3P40198 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.97■□□□□ 0.31
CEACAM3P40198 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CEACAM3P40198 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.97■□□□□ 0.31
CEACAM3P40198 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CEACAM3P40198 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.97■□□□□ 0.31
CEACAM3P40198 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.97■□□□□ 0.31
CEACAM3P40198 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CEACAM3P40198 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CEACAM3P40198 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CEACAM3P40198 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.97■□□□□ 0.31
CEACAM3P40198 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.97■□□□□ 0.31
CEACAM3P40198 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CEACAM3P40198 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CEACAM3P40198 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.97■□□□□ 0.31
CEACAM3P40198 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.96■□□□□ 0.31
CEACAM3P40198 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CEACAM3P40198 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CEACAM3P40198 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CEACAM3P40198 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CEACAM3P40198 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.96■□□□□ 0.31
CEACAM3P40198 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.96■□□□□ 0.31
CEACAM3P40198 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CEACAM3P40198 AC245052.3-201ENST00000450182 901 ntBASIC16.96■□□□□ 0.31
CEACAM3P40198 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.96■□□□□ 0.31
CEACAM3P40198 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.96■□□□□ 0.31
CEACAM3P40198 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CEACAM3P40198 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.96■□□□□ 0.31
CEACAM3P40198 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.96■□□□□ 0.31
CEACAM3P40198 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CEACAM3P40198 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CEACAM3P40198 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CEACAM3P40198 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CEACAM3P40198 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CEACAM3P40198 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CEACAM3P40198 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CEACAM3P40198 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CEACAM3P40198 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.95■□□□□ 0.3
CEACAM3P40198 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.95■□□□□ 0.3
CEACAM3P40198 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CEACAM3P40198 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CEACAM3P40198 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.95■□□□□ 0.3
CEACAM3P40198 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.95■□□□□ 0.3
CEACAM3P40198 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CEACAM3P40198 KRT18P61-201ENST00000585825 1298 ntBASIC16.95■□□□□ 0.3
CEACAM3P40198 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CEACAM3P40198 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CEACAM3P40198 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CEACAM3P40198 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CEACAM3P40198 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CEACAM3P40198 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.95■□□□□ 0.3
CEACAM3P40198 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.95■□□□□ 0.3
CEACAM3P40198 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CEACAM3P40198 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.95■□□□□ 0.3
CEACAM3P40198 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.94■□□□□ 0.3
CEACAM3P40198 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CEACAM3P40198 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms