Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GDNFP39905 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GDNFP39905 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GDNFP39905 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.1■□□□□ 0.49
GDNFP39905 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GDNFP39905 AC079089.2-201ENST00000531211 1277 ntBASIC18.1■□□□□ 0.49
GDNFP39905 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GDNFP39905 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
GDNFP39905 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GDNFP39905 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.1■□□□□ 0.49
GDNFP39905 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GDNFP39905 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDNFP39905 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDNFP39905 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDNFP39905 AC006128.1-201ENST00000624704 1661 ntBASIC18.09■□□□□ 0.49
GDNFP39905 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDNFP39905 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
GDNFP39905 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.09■□□□□ 0.49
GDNFP39905 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDNFP39905 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.09■□□□□ 0.49
GDNFP39905 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDNFP39905 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDNFP39905 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDNFP39905 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
GDNFP39905 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.09■□□□□ 0.49
GDNFP39905 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDNFP39905 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GDNFP39905 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDNFP39905 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GDNFP39905 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.08■□□□□ 0.49
GDNFP39905 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GDNFP39905 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.08■□□□□ 0.49
GDNFP39905 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GDNFP39905 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GDNFP39905 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
GDNFP39905 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GDNFP39905 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GDNFP39905 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GDNFP39905 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
GDNFP39905 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
GDNFP39905 AC087289.5-201ENST00000586076 3175 ntBASIC18.08■□□□□ 0.48
GDNFP39905 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GDNFP39905 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GDNFP39905 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.07■□□□□ 0.48
GDNFP39905 OR7E47P-201ENST00000546390 1422 ntBASIC18.07■□□□□ 0.48
GDNFP39905 AC008406.3-201ENST00000620001 1374 ntBASIC18.07■□□□□ 0.48
GDNFP39905 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDNFP39905 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDNFP39905 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GDNFP39905 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDNFP39905 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.07■□□□□ 0.48
GDNFP39905 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDNFP39905 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDNFP39905 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
GDNFP39905 AC092171.4-201ENST00000609130 632 ntBASIC18.07■□□□□ 0.48
GDNFP39905 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GDNFP39905 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDNFP39905 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDNFP39905 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.07■□□□□ 0.48
GDNFP39905 SYT6-210ENST00000641643 1587 ntBASIC18.07■□□□□ 0.48
GDNFP39905 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDNFP39905 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GDNFP39905 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDNFP39905 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.07■□□□□ 0.48
GDNFP39905 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.07■□□□□ 0.48
GDNFP39905 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
GDNFP39905 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.06■□□□□ 0.48
GDNFP39905 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.06■□□□□ 0.48
GDNFP39905 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.06■□□□□ 0.48
GDNFP39905 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.06■□□□□ 0.48
GDNFP39905 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.06■□□□□ 0.48
GDNFP39905 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.06■□□□□ 0.48
GDNFP39905 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
GDNFP39905 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.06■□□□□ 0.48
GDNFP39905 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.06■□□□□ 0.48
GDNFP39905 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.06■□□□□ 0.48
GDNFP39905 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
GDNFP39905 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
GDNFP39905 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.06■□□□□ 0.48
GDNFP39905 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
GDNFP39905 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GDNFP39905 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
GDNFP39905 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDNFP39905 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
GDNFP39905 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDNFP39905 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms