Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP24386 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP24386 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.44■□□□□ 0.7
CHMP24386 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP24386 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP24386 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP24386 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP24386 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHMP24386 LINC01006-201ENST00000333319 2292 ntBASIC19.43■□□□□ 0.7
CHMP24386 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP24386 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP24386 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP24386 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CHMP24386 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP24386 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.43■□□□□ 0.7
CHMP24386 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP24386 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP24386 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP24386 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP24386 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP24386 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP24386 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHMP24386 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.42■□□□□ 0.7
CHMP24386 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP24386 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP24386 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.42■□□□□ 0.7
CHMP24386 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CHMP24386 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 AP004607.7-201ENST00000527152 1677 ntBASIC19.42■□□□□ 0.7
CHMP24386 AC005224.4-201ENST00000583262 1652 ntBASIC19.42■□□□□ 0.7
CHMP24386 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHMP24386 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.42■□□□□ 0.7
CHMP24386 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP24386 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMP24386 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP24386 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP24386 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMP24386 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CHMP24386 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP24386 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP24386 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHMP24386 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.41■□□□□ 0.7
CHMP24386 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CHMP24386 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP24386 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP24386 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHMP24386 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
CHMP24386 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMP24386 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMP24386 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP24386 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP24386 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP24386 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
CHMP24386 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP24386 KRT18P5-201ENST00000436075 1291 ntBASIC19.4■□□□□ 0.7
CHMP24386 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP24386 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.4■□□□□ 0.7
CHMP24386 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP24386 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHMP24386 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP24386 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMP24386 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
CHMP24386 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP24386 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP24386 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP24386 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP24386 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CHMP24386 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP24386 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP24386 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP24386 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMP24386 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CHMP24386 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.39■□□□□ 0.69
CHMP24386 NTF6G-201ENST00000591094 616 ntBASIC19.39■□□□□ 0.69
CHMP24386 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.39■□□□□ 0.69
CHMP24386 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP24386 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP24386 AL049796.1-201ENST00000565336 1766 ntBASIC19.39■□□□□ 0.69
CHMP24386 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMP24386 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP24386 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP24386 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP24386 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP24386 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms