Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.13■□□□□ 0.65
RPS4Y1P22090 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y1P22090 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.13■□□□□ 0.65
RPS4Y1P22090 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y1P22090 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.13■□□□□ 0.65
RPS4Y1P22090 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y1P22090 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.12■□□□□ 0.65
RPS4Y1P22090 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y1P22090 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y1P22090 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y1P22090 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RPS4Y1P22090 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y1P22090 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y1P22090 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RPS4Y1P22090 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RPS4Y1P22090 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.12■□□□□ 0.65
RPS4Y1P22090 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y1P22090 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y1P22090 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RPS4Y1P22090 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y1P22090 KRT18P14-201ENST00000534205 1250 ntBASIC19.12■□□□□ 0.65
RPS4Y1P22090 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y1P22090 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y1P22090 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y1P22090 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y1P22090 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y1P22090 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y1P22090 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y1P22090 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y1P22090 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y1P22090 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y1P22090 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y1P22090 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y1P22090 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 AC011484.1-201ENST00000377652 1995 ntBASIC19.11■□□□□ 0.65
RPS4Y1P22090 FEM1AP1-201ENST00000431297 1995 ntBASIC19.11■□□□□ 0.65
RPS4Y1P22090 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RPS4Y1P22090 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4Y1P22090 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4Y1P22090 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.1■□□□□ 0.65
RPS4Y1P22090 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.1■□□□□ 0.65
RPS4Y1P22090 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.1■□□□□ 0.65
RPS4Y1P22090 AL157384.1-201ENST00000445995 2473 ntBASIC19.1■□□□□ 0.65
RPS4Y1P22090 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4Y1P22090 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4Y1P22090 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.1■□□□□ 0.65
RPS4Y1P22090 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.1■□□□□ 0.65
RPS4Y1P22090 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4Y1P22090 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4Y1P22090 AP001160.3-201ENST00000601484 763 ntBASIC19.1■□□□□ 0.65
RPS4Y1P22090 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4Y1P22090 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RPS4Y1P22090 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RPS4Y1P22090 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RPS4Y1P22090 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
RPS4Y1P22090 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS4Y1P22090 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.09■□□□□ 0.65
RPS4Y1P22090 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.09■□□□□ 0.65
RPS4Y1P22090 AC120498.10-201ENST00000621827 505 ntBASIC19.09■□□□□ 0.65
RPS4Y1P22090 LINC01521-201ENST00000504184 1943 ntBASIC19.09■□□□□ 0.65
RPS4Y1P22090 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS4Y1P22090 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RPS4Y1P22090 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPS4Y1P22090 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS4Y1P22090 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RPS4Y1P22090 AC004854.2-201ENST00000608450 1441 ntBASIC19.08■□□□□ 0.65
RPS4Y1P22090 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS4Y1P22090 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS4Y1P22090 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RPS4Y1P22090 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RPS4Y1P22090 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.65
RPS4Y1P22090 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RPS4Y1P22090 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
RPS4Y1P22090 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.08■□□□□ 0.64
RPS4Y1P22090 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPS4Y1P22090 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.08■□□□□ 0.64
RPS4Y1P22090 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.08■□□□□ 0.64
RPS4Y1P22090 KRT18P20-201ENST00000548986 1279 ntBASIC19.08■□□□□ 0.64
RPS4Y1P22090 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.08■□□□□ 0.64
RPS4Y1P22090 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RPS4Y1P22090 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.08■□□□□ 0.64
RPS4Y1P22090 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RPS4Y1P22090 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPS4Y1P22090 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms