Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CCL4P13236 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCL4P13236 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.78■□□□□ 0.76
CCL4P13236 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCL4P13236 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCL4P13236 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.78■□□□□ 0.76
CCL4P13236 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.78■□□□□ 0.76
CCL4P13236 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCL4P13236 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCL4P13236 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.78■□□□□ 0.76
CCL4P13236 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCL4P13236 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCL4P13236 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCL4P13236 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCL4P13236 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCL4P13236 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCL4P13236 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCL4P13236 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCL4P13236 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCL4P13236 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL4P13236 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCL4P13236 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL4P13236 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCL4P13236 MCRIP2P1-201ENST00000394346 511 ntBASIC19.77■□□□□ 0.76
CCL4P13236 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
CCL4P13236 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
CCL4P13236 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.77■□□□□ 0.76
CCL4P13236 AL589743.5-201ENST00000616611 1050 ntBASIC19.77■□□□□ 0.76
CCL4P13236 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL4P13236 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.77■□□□□ 0.76
CCL4P13236 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCL4P13236 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
CCL4P13236 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL4P13236 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL4P13236 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL4P13236 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL4P13236 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL4P13236 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL4P13236 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.76■□□□□ 0.75
CCL4P13236 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL4P13236 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL4P13236 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCL4P13236 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CCL4P13236 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCL4P13236 AC008403.3-201ENST00000598924 454 ntBASIC19.76■□□□□ 0.75
CCL4P13236 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL4P13236 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.75■□□□□ 0.75
CCL4P13236 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCL4P13236 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL4P13236 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL4P13236 KRT18P68-201ENST00000392293 1000 ntBASIC19.75■□□□□ 0.75
CCL4P13236 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL4P13236 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.75■□□□□ 0.75
CCL4P13236 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.75■□□□□ 0.75
CCL4P13236 AC060766.5-201ENST00000590539 871 ntBASIC19.75■□□□□ 0.75
CCL4P13236 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CCL4P13236 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.75■□□□□ 0.75
CCL4P13236 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL4P13236 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCL4P13236 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL4P13236 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL4P13236 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL4P13236 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.74■□□□□ 0.75
CCL4P13236 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.74■□□□□ 0.75
CCL4P13236 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCL4P13236 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL4P13236 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.74■□□□□ 0.75
CCL4P13236 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL4P13236 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.74■□□□□ 0.75
CCL4P13236 AC007322.3-201ENST00000426526 701 ntBASIC19.74■□□□□ 0.75
CCL4P13236 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.74■□□□□ 0.75
CCL4P13236 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.74■□□□□ 0.75
CCL4P13236 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.74■□□□□ 0.75
CCL4P13236 HLA-B-256ENST00000639848 1089 ntBASIC19.74■□□□□ 0.75
CCL4P13236 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL4P13236 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.74■□□□□ 0.75
CCL4P13236 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCL4P13236 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL4P13236 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL4P13236 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCL4P13236 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL4P13236 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCL4P13236 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL4P13236 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.73■□□□□ 0.75
CCL4P13236 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.73■□□□□ 0.75
CCL4P13236 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL4P13236 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL4P13236 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL4P13236 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL4P13236 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL4P13236 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCL4P13236 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCL4P13236 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL4P13236 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCL4P13236 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.73■□□□□ 0.75
CCL4P13236 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL4P13236 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.73■□□□□ 0.75
CCL4P13236 UNC93B4-201ENST00000505679 747 ntBASIC19.73■□□□□ 0.75
CCL4P13236 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL4P13236 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms