Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.01■□□□□ 0.63
BMP4P12644 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.01■□□□□ 0.63
BMP4P12644 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.01■□□□□ 0.63
BMP4P12644 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.01■□□□□ 0.63
BMP4P12644 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
BMP4P12644 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19■□□□□ 0.63
BMP4P12644 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
BMP4P12644 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19■□□□□ 0.63
BMP4P12644 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
BMP4P12644 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
BMP4P12644 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BMP4P12644 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19■□□□□ 0.63
BMP4P12644 AC104564.3-201ENST00000582367 638 ntBASIC19■□□□□ 0.63
BMP4P12644 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
BMP4P12644 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BMP4P12644 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19■□□□□ 0.63
BMP4P12644 GABARAPL3-202ENST00000624044 1851 ntBASIC19■□□□□ 0.63
BMP4P12644 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19■□□□□ 0.63
BMP4P12644 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BMP4P12644 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19■□□□□ 0.63
BMP4P12644 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BMP4P12644 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.99■□□□□ 0.63
BMP4P12644 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
BMP4P12644 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
BMP4P12644 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BMP4P12644 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.99■□□□□ 0.63
BMP4P12644 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.99■□□□□ 0.63
BMP4P12644 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.99■□□□□ 0.63
BMP4P12644 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
BMP4P12644 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BMP4P12644 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BMP4P12644 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
BMP4P12644 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
BMP4P12644 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
BMP4P12644 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
BMP4P12644 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.99■□□□□ 0.63
BMP4P12644 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.98■□□□□ 0.63
BMP4P12644 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.98■□□□□ 0.63
BMP4P12644 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.98■□□□□ 0.63
BMP4P12644 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
BMP4P12644 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
BMP4P12644 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.98■□□□□ 0.63
BMP4P12644 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.98■□□□□ 0.63
BMP4P12644 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 LINC01960-201ENST00000563759 1884 ntBASIC18.98■□□□□ 0.63
BMP4P12644 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
BMP4P12644 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
BMP4P12644 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 TSPY26P-201ENST00000476365 1326 ntBASIC18.98■□□□□ 0.63
BMP4P12644 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP4P12644 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BMP4P12644 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP4P12644 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP4P12644 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP4P12644 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP4P12644 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BMP4P12644 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.97■□□□□ 0.63
BMP4P12644 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP4P12644 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP4P12644 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
BMP4P12644 SLC47A1P1-202ENST00000449666 945 ntBASIC18.97■□□□□ 0.63
BMP4P12644 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.97■□□□□ 0.63
BMP4P12644 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.97■□□□□ 0.63
BMP4P12644 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.97■□□□□ 0.63
BMP4P12644 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP4P12644 AC092666.2-201ENST00000613287 246 ntBASIC18.97■□□□□ 0.63
BMP4P12644 AL358852.1-201ENST00000623174 1268 ntBASIC18.97■□□□□ 0.63
BMP4P12644 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
BMP4P12644 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP4P12644 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.97■□□□□ 0.63
BMP4P12644 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.97■□□□□ 0.63
BMP4P12644 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP4P12644 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
BMP4P12644 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP4P12644 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms