Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.49■□□□□ 0.23
PF4V1P10720 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.49■□□□□ 0.23
PF4V1P10720 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.49■□□□□ 0.23
PF4V1P10720 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.49■□□□□ 0.23
PF4V1P10720 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.49■□□□□ 0.23
PF4V1P10720 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PF4V1P10720 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PF4V1P10720 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PF4V1P10720 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PF4V1P10720 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PF4V1P10720 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PF4V1P10720 AC010141.2-201ENST00000452426 721 ntBASIC16.49■□□□□ 0.23
PF4V1P10720 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.49■□□□□ 0.23
PF4V1P10720 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.49■□□□□ 0.23
PF4V1P10720 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.49■□□□□ 0.23
PF4V1P10720 AC005181.1-201ENST00000604782 1256 ntBASIC16.49■□□□□ 0.23
PF4V1P10720 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.49■□□□□ 0.23
PF4V1P10720 AL121832.2-201ENST00000610979 668 ntBASIC16.49■□□□□ 0.23
PF4V1P10720 AC120498.10-201ENST00000621827 505 ntBASIC16.49■□□□□ 0.23
PF4V1P10720 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PF4V1P10720 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PF4V1P10720 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PF4V1P10720 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.49■□□□□ 0.23
PF4V1P10720 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PF4V1P10720 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.49■□□□□ 0.23
PF4V1P10720 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PF4V1P10720 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PF4V1P10720 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PF4V1P10720 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.48■□□□□ 0.23
PF4V1P10720 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.48■□□□□ 0.23
PF4V1P10720 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.48■□□□□ 0.23
PF4V1P10720 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PF4V1P10720 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
PF4V1P10720 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.48■□□□□ 0.23
PF4V1P10720 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PF4V1P10720 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
PF4V1P10720 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PF4V1P10720 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.48■□□□□ 0.23
PF4V1P10720 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PF4V1P10720 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PF4V1P10720 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.47■□□□□ 0.23
PF4V1P10720 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PF4V1P10720 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PF4V1P10720 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PF4V1P10720 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PF4V1P10720 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PF4V1P10720 SLC29A4P1-201ENST00000398760 971 ntBASIC16.47■□□□□ 0.23
PF4V1P10720 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PF4V1P10720 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.47■□□□□ 0.23
PF4V1P10720 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.47■□□□□ 0.23
PF4V1P10720 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.47■□□□□ 0.23
PF4V1P10720 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PF4V1P10720 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
PF4V1P10720 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PF4V1P10720 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PF4V1P10720 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PF4V1P10720 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.46■□□□□ 0.23
PF4V1P10720 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.46■□□□□ 0.23
PF4V1P10720 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PF4V1P10720 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
PF4V1P10720 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.46■□□□□ 0.23
PF4V1P10720 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PF4V1P10720 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PF4V1P10720 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PF4V1P10720 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PF4V1P10720 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PF4V1P10720 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PF4V1P10720 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PF4V1P10720 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PF4V1P10720 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.46■□□□□ 0.22
PF4V1P10720 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PF4V1P10720 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PF4V1P10720 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.45■□□□□ 0.22
PF4V1P10720 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.45■□□□□ 0.22
PF4V1P10720 POU5F1P4-201ENST00000413175 1085 ntBASIC16.45■□□□□ 0.22
PF4V1P10720 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.45■□□□□ 0.22
PF4V1P10720 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.45■□□□□ 0.22
PF4V1P10720 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.45■□□□□ 0.22
PF4V1P10720 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.45■□□□□ 0.22
PF4V1P10720 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.45■□□□□ 0.22
PF4V1P10720 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PF4V1P10720 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.45■□□□□ 0.22
PF4V1P10720 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PF4V1P10720 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PF4V1P10720 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PF4V1P10720 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.45■□□□□ 0.22
PF4V1P10720 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms