Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 NCF1B-203ENST00000435988 1254 ntBASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 AC104771.1-201ENST00000603335 964 ntBASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.85■□□□□ 0.61
TMIGD3P0DMS9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 GPX1P1-201ENST00000388829 606 ntBASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 PKD1P6-201ENST00000343738 4769 ntBASIC18.84■□□□□ 0.61
TMIGD3P0DMS9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.83■□□□□ 0.61
TMIGD3P0DMS9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.83■□□□□ 0.61
TMIGD3P0DMS9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMIGD3P0DMS9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.83■□□□□ 0.61
TMIGD3P0DMS9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMIGD3P0DMS9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.83■□□□□ 0.61
TMIGD3P0DMS9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMIGD3P0DMS9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.83■□□□□ 0.6
TMIGD3P0DMS9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.83■□□□□ 0.6
TMIGD3P0DMS9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMIGD3P0DMS9 AC005181.1-201ENST00000604782 1256 ntBASIC18.83■□□□□ 0.6
TMIGD3P0DMS9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMIGD3P0DMS9 AC010536.3-201ENST00000620306 533 ntBASIC18.83■□□□□ 0.6
TMIGD3P0DMS9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMIGD3P0DMS9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMIGD3P0DMS9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.83■□□□□ 0.6
TMIGD3P0DMS9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
TMIGD3P0DMS9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TMIGD3P0DMS9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 AL355802.2-201ENST00000402069 882 ntBASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMIGD3P0DMS9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 AL121832.2-201ENST00000610979 668 ntBASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 AC008175.2-201ENST00000612840 297 ntBASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 AC120498.10-201ENST00000621827 505 ntBASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMIGD3P0DMS9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMIGD3P0DMS9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TMIGD3P0DMS9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMIGD3P0DMS9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMIGD3P0DMS9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.8■□□□□ 0.6
TMIGD3P0DMS9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMIGD3P0DMS9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.8■□□□□ 0.6
TMIGD3P0DMS9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms