Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTA3P0C7M3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTA3P0C7M3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SFTA3P0C7M3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTA3P0C7M3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SFTA3P0C7M3 DUX4L18-201ENST00000553347 1267 ntBASIC16.66■□□□□ 0.26
SFTA3P0C7M3 AC087393.1-201ENST00000582896 145 ntBASIC16.66■□□□□ 0.26
SFTA3P0C7M3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SFTA3P0C7M3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SFTA3P0C7M3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTA3P0C7M3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTA3P0C7M3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 C17orf82-201ENST00000623772 1530 ntBASIC16.65■□□□□ 0.26
SFTA3P0C7M3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SFTA3P0C7M3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SFTA3P0C7M3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 AC026471.6-201ENST00000622954 1905 ntBASIC16.64■□□□□ 0.25
SFTA3P0C7M3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.64■□□□□ 0.25
SFTA3P0C7M3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SFTA3P0C7M3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTA3P0C7M3 AC020907.5-201ENST00000624372 1936 ntBASIC16.62■□□□□ 0.25
SFTA3P0C7M3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTA3P0C7M3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTA3P0C7M3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTA3P0C7M3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTA3P0C7M3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTA3P0C7M3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SFTA3P0C7M3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.62■□□□□ 0.25
SFTA3P0C7M3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.62■□□□□ 0.25
SFTA3P0C7M3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SFTA3P0C7M3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SFTA3P0C7M3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTA3P0C7M3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms