Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1AP08908 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.02■□□□□ 0.64
HTR1AP08908 AL499627.2-201ENST00000606283 725 ntBASIC19.02■□□□□ 0.64
HTR1AP08908 MIR4787-201ENST00000607364 84 ntBASIC19.02■□□□□ 0.64
HTR1AP08908 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.02■□□□□ 0.64
HTR1AP08908 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
HTR1AP08908 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1AP08908 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HTR1AP08908 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1AP08908 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HTR1AP08908 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HTR1AP08908 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HTR1AP08908 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.02■□□□□ 0.63
HTR1AP08908 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.01■□□□□ 0.63
HTR1AP08908 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HTR1AP08908 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HTR1AP08908 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.01■□□□□ 0.63
HTR1AP08908 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
HTR1AP08908 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 AC010997.5-201ENST00000609182 354 ntBASIC19.01■□□□□ 0.63
HTR1AP08908 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HTR1AP08908 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 AC099778.1-201ENST00000568593 1911 ntBASIC19.01■□□□□ 0.63
HTR1AP08908 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTR1AP08908 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HTR1AP08908 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTR1AP08908 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19■□□□□ 0.63
HTR1AP08908 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19■□□□□ 0.63
HTR1AP08908 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HTR1AP08908 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTR1AP08908 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HTR1AP08908 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HTR1AP08908 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTR1AP08908 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTR1AP08908 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19■□□□□ 0.63
HTR1AP08908 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19■□□□□ 0.63
HTR1AP08908 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTR1AP08908 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19■□□□□ 0.63
HTR1AP08908 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HTR1AP08908 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19■□□□□ 0.63
HTR1AP08908 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HTR1AP08908 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19■□□□□ 0.63
HTR1AP08908 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1AP08908 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1AP08908 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1AP08908 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.99■□□□□ 0.63
HTR1AP08908 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1AP08908 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.99■□□□□ 0.63
HTR1AP08908 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1AP08908 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1AP08908 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1AP08908 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HTR1AP08908 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTR1AP08908 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTR1AP08908 AC007225.1-201ENST00000566331 1836 ntBASIC18.98■□□□□ 0.63
HTR1AP08908 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTR1AP08908 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTR1AP08908 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.98■□□□□ 0.63
HTR1AP08908 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
HTR1AP08908 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.98■□□□□ 0.63
HTR1AP08908 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.98■□□□□ 0.63
HTR1AP08908 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTR1AP08908 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.98■□□□□ 0.63
HTR1AP08908 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTR1AP08908 BX323043.1-201ENST00000641006 1765 ntBASIC18.98■□□□□ 0.63
HTR1AP08908 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
HTR1AP08908 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.98■□□□□ 0.63
HTR1AP08908 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.98■□□□□ 0.63
HTR1AP08908 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1AP08908 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1AP08908 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1AP08908 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.97■□□□□ 0.63
HTR1AP08908 AC116562.4-201ENST00000641316 2276 ntBASIC18.97■□□□□ 0.63
HTR1AP08908 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1AP08908 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1AP08908 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1AP08908 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HTR1AP08908 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1AP08908 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1AP08908 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.97■□□□□ 0.63
HTR1AP08908 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1AP08908 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1AP08908 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1AP08908 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.97■□□□□ 0.63
HTR1AP08908 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1AP08908 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HTR1AP08908 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HTR1AP08908 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms