Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSDP07339 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CTSDP07339 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSDP07339 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTSDP07339 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.29■□□□□ 0.36
CTSDP07339 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.29■□□□□ 0.36
CTSDP07339 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.29■□□□□ 0.36
CTSDP07339 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTSDP07339 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSDP07339 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CTSDP07339 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSDP07339 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSDP07339 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSDP07339 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CTSDP07339 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSDP07339 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTSDP07339 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CTSDP07339 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSDP07339 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSDP07339 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSDP07339 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CTSDP07339 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSDP07339 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.28■□□□□ 0.36
CTSDP07339 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.28■□□□□ 0.36
CTSDP07339 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CTSDP07339 PCDHAC2-203ENST00000615316 3011 ntBASIC17.28■□□□□ 0.36
CTSDP07339 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSDP07339 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSDP07339 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSDP07339 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSDP07339 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSDP07339 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSDP07339 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.28■□□□□ 0.36
CTSDP07339 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSDP07339 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSDP07339 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CTSDP07339 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSDP07339 AL162377.1-201ENST00000618844 1793 ntBASIC17.28■□□□□ 0.36
CTSDP07339 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTSDP07339 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.28■□□□□ 0.36
CTSDP07339 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.28■□□□□ 0.36
CTSDP07339 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.27■□□□□ 0.36
CTSDP07339 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.27■□□□□ 0.36
CTSDP07339 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSDP07339 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTSDP07339 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSDP07339 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.27■□□□□ 0.36
CTSDP07339 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSDP07339 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.27■□□□□ 0.36
CTSDP07339 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.27■□□□□ 0.36
CTSDP07339 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.27■□□□□ 0.36
CTSDP07339 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSDP07339 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSDP07339 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTSDP07339 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CTSDP07339 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.27■□□□□ 0.36
CTSDP07339 AC092171.4-201ENST00000609130 632 ntBASIC17.27■□□□□ 0.36
CTSDP07339 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTSDP07339 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTSDP07339 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTSDP07339 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSDP07339 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSDP07339 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CTSDP07339 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSDP07339 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSDP07339 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSDP07339 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.26■□□□□ 0.35
CTSDP07339 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSDP07339 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSDP07339 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSDP07339 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTSDP07339 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSDP07339 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSDP07339 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.26■□□□□ 0.35
CTSDP07339 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSDP07339 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.26■□□□□ 0.35
CTSDP07339 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSDP07339 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSDP07339 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSDP07339 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSDP07339 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.26■□□□□ 0.35
CTSDP07339 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CTSDP07339 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.26■□□□□ 0.35
CTSDP07339 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSDP07339 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSDP07339 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSDP07339 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTSDP07339 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CTSDP07339 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSDP07339 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSDP07339 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.25■□□□□ 0.35
CTSDP07339 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.25■□□□□ 0.35
CTSDP07339 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.25■□□□□ 0.35
CTSDP07339 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.25■□□□□ 0.35
CTSDP07339 AP005435.1-201ENST00000529293 1178 ntBASIC17.25■□□□□ 0.35
CTSDP07339 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTSDP07339 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.25■□□□□ 0.35
CTSDP07339 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSDP07339 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CTSDP07339 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms