Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TCRAP04437 AC007225.1-201ENST00000566331 1836 ntBASIC15.84■□□□□ 0.13
TCRAP04437 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.84■□□□□ 0.13
TCRAP04437 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRAP04437 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TCRAP04437 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCRAP04437 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.84■□□□□ 0.13
TCRAP04437 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCRAP04437 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
TCRAP04437 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TCRAP04437 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRAP04437 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TCRAP04437 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRAP04437 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TCRAP04437 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRAP04437 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TCRAP04437 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRAP04437 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.84■□□□□ 0.13
TCRAP04437 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCRAP04437 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.84■□□□□ 0.13
TCRAP04437 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCRAP04437 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.84■□□□□ 0.13
TCRAP04437 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRAP04437 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCRAP04437 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.13
TCRAP04437 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TCRAP04437 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TCRAP04437 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.83■□□□□ 0.13
TCRAP04437 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TCRAP04437 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.83■□□□□ 0.12
TCRAP04437 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.83■□□□□ 0.12
TCRAP04437 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TCRAP04437 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.83■□□□□ 0.12
TCRAP04437 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TCRAP04437 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TCRAP04437 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TCRAP04437 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TCRAP04437 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.83■□□□□ 0.12
TCRAP04437 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TCRAP04437 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TCRAP04437 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
TCRAP04437 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.83■□□□□ 0.12
TCRAP04437 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRAP04437 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRAP04437 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
TCRAP04437 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TCRAP04437 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TCRAP04437 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TCRAP04437 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
TCRAP04437 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TCRAP04437 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TCRAP04437 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRAP04437 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRAP04437 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TCRAP04437 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRAP04437 AC009299.2-201ENST00000482477 511 ntBASIC15.82■□□□□ 0.12
TCRAP04437 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TCRAP04437 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TCRAP04437 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRAP04437 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.82■□□□□ 0.12
TCRAP04437 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRAP04437 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TCRAP04437 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRAP04437 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRAP04437 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRAP04437 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRAP04437 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.82■□□□□ 0.12
TCRAP04437 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRAP04437 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRAP04437 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TCRAP04437 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TCRAP04437 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 SRD5A1P1-201ENST00000442297 786 ntBASIC15.81■□□□□ 0.12
TCRAP04437 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TCRAP04437 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.81■□□□□ 0.12
TCRAP04437 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.81■□□□□ 0.12
TCRAP04437 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.81■□□□□ 0.12
TCRAP04437 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.81■□□□□ 0.12
TCRAP04437 AP005435.1-201ENST00000529293 1178 ntBASIC15.81■□□□□ 0.12
TCRAP04437 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.81■□□□□ 0.12
TCRAP04437 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.81■□□□□ 0.12
TCRAP04437 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 AL356740.2-201ENST00000601559 647 ntBASIC15.81■□□□□ 0.12
TCRAP04437 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.81■□□□□ 0.12
TCRAP04437 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.81■□□□□ 0.12
TCRAP04437 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.81■□□□□ 0.12
TCRAP04437 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.81■□□□□ 0.12
TCRAP04437 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRAP04437 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms