Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAF1P04049 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAF1P04049 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAF1P04049 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAF1P04049 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.82■□□□□ 0.6
RAF1P04049 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.82■□□□□ 0.6
RAF1P04049 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.82■□□□□ 0.6
RAF1P04049 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.82■□□□□ 0.6
RAF1P04049 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAF1P04049 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAF1P04049 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAF1P04049 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.82■□□□□ 0.6
RAF1P04049 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAF1P04049 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.82■□□□□ 0.6
RAF1P04049 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAF1P04049 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
RAF1P04049 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAF1P04049 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAF1P04049 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAF1P04049 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.81■□□□□ 0.6
RAF1P04049 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
RAF1P04049 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RAF1P04049 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAF1P04049 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAF1P04049 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAF1P04049 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAF1P04049 KRT18P11-201ENST00000435214 1283 ntBASIC18.81■□□□□ 0.6
RAF1P04049 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.81■□□□□ 0.6
RAF1P04049 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAF1P04049 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAF1P04049 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAF1P04049 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAF1P04049 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAF1P04049 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAF1P04049 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
RAF1P04049 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAF1P04049 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAF1P04049 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAF1P04049 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAF1P04049 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAF1P04049 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAF1P04049 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAF1P04049 CROCCP5-201ENST00000436658 830 ntBASIC18.8■□□□□ 0.6
RAF1P04049 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.8■□□□□ 0.6
RAF1P04049 TMEM191A-211ENST00000637163 1067 ntBASIC18.8■□□□□ 0.6
RAF1P04049 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RAF1P04049 FEM1AP4-201ENST00000443167 1987 ntBASIC18.8■□□□□ 0.6
RAF1P04049 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAF1P04049 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.8■□□□□ 0.6
RAF1P04049 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAF1P04049 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAF1P04049 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAF1P04049 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAF1P04049 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAF1P04049 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RAF1P04049 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAF1P04049 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAF1P04049 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.79■□□□□ 0.6
RAF1P04049 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.79■□□□□ 0.6
RAF1P04049 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.79■□□□□ 0.6
RAF1P04049 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAF1P04049 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RAF1P04049 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.79■□□□□ 0.6
RAF1P04049 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RAF1P04049 NCF1B-203ENST00000435988 1254 ntBASIC18.79■□□□□ 0.6
RAF1P04049 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.79■□□□□ 0.6
RAF1P04049 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.79■□□□□ 0.6
RAF1P04049 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.79■□□□□ 0.6
RAF1P04049 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.79■□□□□ 0.6
RAF1P04049 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAF1P04049 BX005040.4-201ENST00000637145 1518 ntBASIC18.79■□□□□ 0.6
RAF1P04049 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAF1P04049 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAF1P04049 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RAF1P04049 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.78■□□□□ 0.6
RAF1P04049 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RAF1P04049 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.78■□□□□ 0.6
RAF1P04049 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.78■□□□□ 0.6
RAF1P04049 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.78■□□□□ 0.6
RAF1P04049 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAF1P04049 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAF1P04049 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAF1P04049 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAF1P04049 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAF1P04049 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.77■□□□□ 0.6
RAF1P04049 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.77■□□□□ 0.6
RAF1P04049 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms