Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT6AP02538 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
KRT6AP02538 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT6AP02538 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT6AP02538 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT6AP02538 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.15■□□□□ 0.82
KRT6AP02538 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.15■□□□□ 0.82
KRT6AP02538 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.15■□□□□ 0.82
KRT6AP02538 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT6AP02538 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT6AP02538 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KRT6AP02538 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
KRT6AP02538 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
KRT6AP02538 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.14■□□□□ 0.82
KRT6AP02538 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KRT6AP02538 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT6AP02538 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT6AP02538 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT6AP02538 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT6AP02538 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT6AP02538 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT6AP02538 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT6AP02538 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT6AP02538 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT6AP02538 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT6AP02538 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT6AP02538 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT6AP02538 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT6AP02538 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT6AP02538 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT6AP02538 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT6AP02538 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT6AP02538 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT6AP02538 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
KRT6AP02538 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT6AP02538 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT6AP02538 AC006128.1-201ENST00000624704 1661 ntBASIC20.13■□□□□ 0.81
KRT6AP02538 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
KRT6AP02538 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.13■□□□□ 0.81
KRT6AP02538 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
KRT6AP02538 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT6AP02538 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.13■□□□□ 0.81
KRT6AP02538 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
KRT6AP02538 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
KRT6AP02538 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT6AP02538 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT6AP02538 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT6AP02538 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
KRT6AP02538 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.13■□□□□ 0.81
KRT6AP02538 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
KRT6AP02538 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
KRT6AP02538 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.13■□□□□ 0.81
KRT6AP02538 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.13■□□□□ 0.81
KRT6AP02538 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT6AP02538 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT6AP02538 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRT6AP02538 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.12■□□□□ 0.81
KRT6AP02538 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.12■□□□□ 0.81
KRT6AP02538 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRT6AP02538 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT6AP02538 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
KRT6AP02538 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRT6AP02538 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRT6AP02538 AC005837.3-201ENST00000612163 286 ntBASIC20.12■□□□□ 0.81
KRT6AP02538 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT6AP02538 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.12■□□□□ 0.81
KRT6AP02538 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT6AP02538 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT6AP02538 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT6AP02538 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
KRT6AP02538 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRT6AP02538 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
KRT6AP02538 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT6AP02538 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT6AP02538 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT6AP02538 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT6AP02538 AC121338.2-201ENST00000622535 1744 ntBASIC20.11■□□□□ 0.81
KRT6AP02538 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
KRT6AP02538 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT6AP02538 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
KRT6AP02538 IRS3P-201ENST00000223076 1006 ntBASIC20.11■□□□□ 0.81
KRT6AP02538 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT6AP02538 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
KRT6AP02538 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT6AP02538 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.11■□□□□ 0.81
KRT6AP02538 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.11■□□□□ 0.81
KRT6AP02538 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.11■□□□□ 0.81
KRT6AP02538 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT6AP02538 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT6AP02538 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT6AP02538 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT6AP02538 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
KRT6AP02538 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.11■□□□□ 0.81
KRT6AP02538 AP004607.4-201ENST00000530158 1459 ntBASIC20.11■□□□□ 0.81
KRT6AP02538 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT6AP02538 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT6AP02538 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT6AP02538 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT6AP02538 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT6AP02538 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms