Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 AF213884.3-201ENST00000563833 479 ntBASIC18.67■□□□□ 0.58
HLA-DQA2P01906 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 BX005040.4-201ENST00000637145 1518 ntBASIC18.66■□□□□ 0.58
HLA-DQA2P01906 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 AC110285.6-201ENST00000617652 491 ntBASIC18.66■□□□□ 0.58
HLA-DQA2P01906 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 RASA4CP-201ENST00000424092 1398 ntBASIC18.66■□□□□ 0.58
HLA-DQA2P01906 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQA2P01906 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 AC091305.1-201ENST00000479476 895 ntBASIC18.65■□□□□ 0.58
HLA-DQA2P01906 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 AC005224.4-201ENST00000583262 1652 ntBASIC18.65■□□□□ 0.58
HLA-DQA2P01906 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQA2P01906 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DQA2P01906 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DQA2P01906 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQA2P01906 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DQA2P01906 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DQA2P01906 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA2P01906 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HLA-DQA2P01906 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.63■□□□□ 0.57
HLA-DQA2P01906 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA2P01906 MIR572-201ENST00000384983 95 ntBASIC18.63■□□□□ 0.57
HLA-DQA2P01906 MIR939-201ENST00000401314 82 ntBASIC18.63■□□□□ 0.57
HLA-DQA2P01906 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DQA2P01906 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.63■□□□□ 0.57
HLA-DQA2P01906 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
HLA-DQA2P01906 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA2P01906 AC055733.4-201ENST00000638462 1354 ntBASIC18.63■□□□□ 0.57
HLA-DQA2P01906 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms