Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.05■□□□□ 0.96
USP1O94782 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.05■□□□□ 0.96
USP1O94782 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP1O94782 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP1O94782 AL157384.1-201ENST00000445995 2473 ntBASIC21.04■□□□□ 0.96
USP1O94782 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.04■□□□□ 0.96
USP1O94782 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
USP1O94782 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP1O94782 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP1O94782 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP1O94782 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
USP1O94782 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP1O94782 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP1O94782 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP1O94782 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP1O94782 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.04■□□□□ 0.96
USP1O94782 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.04■□□□□ 0.96
USP1O94782 AC053503.5-201ENST00000601508 636 ntBASIC21.04■□□□□ 0.96
USP1O94782 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP1O94782 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.04■□□□□ 0.96
USP1O94782 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP1O94782 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP1O94782 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP1O94782 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
USP1O94782 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP1O94782 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.03■□□□□ 0.96
USP1O94782 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP1O94782 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP1O94782 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
USP1O94782 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
USP1O94782 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP1O94782 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP1O94782 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.03■□□□□ 0.96
USP1O94782 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP1O94782 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.03■□□□□ 0.96
USP1O94782 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.03■□□□□ 0.96
USP1O94782 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.03■□□□□ 0.96
USP1O94782 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.03■□□□□ 0.96
USP1O94782 AL358852.1-201ENST00000623174 1268 ntBASIC21.03■□□□□ 0.96
USP1O94782 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.03■□□□□ 0.96
USP1O94782 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
USP1O94782 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP1O94782 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
USP1O94782 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
USP1O94782 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP1O94782 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.03■□□□□ 0.96
USP1O94782 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.03■□□□□ 0.96
USP1O94782 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP1O94782 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP1O94782 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP1O94782 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP1O94782 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.02■□□□□ 0.96
USP1O94782 AC006128.1-201ENST00000624704 1661 ntBASIC21.02■□□□□ 0.96
USP1O94782 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP1O94782 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP1O94782 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP1O94782 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.02■□□□□ 0.96
USP1O94782 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP1O94782 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP1O94782 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP1O94782 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP1O94782 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP1O94782 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP1O94782 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP1O94782 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP1O94782 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP1O94782 PLK5-205ENST00000642079 1969 ntBASIC21.01■□□□□ 0.95
USP1O94782 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP1O94782 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
USP1O94782 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
USP1O94782 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP1O94782 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP1O94782 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.01■□□□□ 0.95
USP1O94782 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.01■□□□□ 0.95
USP1O94782 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
USP1O94782 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP1O94782 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP1O94782 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.01■□□□□ 0.95
USP1O94782 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
USP1O94782 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP1O94782 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.01■□□□□ 0.95
USP1O94782 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP1O94782 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.01■□□□□ 0.95
USP1O94782 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
USP1O94782 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.01■□□□□ 0.95
USP1O94782 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP1O94782 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
USP1O94782 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.01■□□□□ 0.95
USP1O94782 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP1O94782 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
USP1O94782 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
USP1O94782 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP1O94782 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
USP1O94782 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21■□□□□ 0.95
USP1O94782 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP1O94782 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP1O94782 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21■□□□□ 0.95
USP1O94782 NT5C3AP1-201ENST00000394500 1012 ntBASIC21■□□□□ 0.95
USP1O94782 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP1O94782 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms