Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.42■□□□□ 0.7
HCN1O60741 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCN1O60741 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCN1O60741 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HCN1O60741 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.42■□□□□ 0.7
HCN1O60741 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.42■□□□□ 0.7
HCN1O60741 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
HCN1O60741 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HCN1O60741 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.42■□□□□ 0.7
HCN1O60741 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCN1O60741 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.42■□□□□ 0.7
HCN1O60741 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HCN1O60741 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.42■□□□□ 0.7
HCN1O60741 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCN1O60741 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
HCN1O60741 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.42■□□□□ 0.7
HCN1O60741 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HCN1O60741 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCN1O60741 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HCN1O60741 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HCN1O60741 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.41■□□□□ 0.7
HCN1O60741 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HCN1O60741 KRT18P11-201ENST00000435214 1283 ntBASIC19.41■□□□□ 0.7
HCN1O60741 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCN1O60741 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.41■□□□□ 0.7
HCN1O60741 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.41■□□□□ 0.7
HCN1O60741 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.41■□□□□ 0.7
HCN1O60741 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HCN1O60741 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCN1O60741 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCN1O60741 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCN1O60741 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.41■□□□□ 0.7
HCN1O60741 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HCN1O60741 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.4■□□□□ 0.7
HCN1O60741 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HCN1O60741 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.4■□□□□ 0.7
HCN1O60741 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCN1O60741 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCN1O60741 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCN1O60741 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HCN1O60741 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HCN1O60741 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HCN1O60741 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCN1O60741 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HCN1O60741 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.4■□□□□ 0.7
HCN1O60741 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.4■□□□□ 0.7
HCN1O60741 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCN1O60741 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.4■□□□□ 0.7
HCN1O60741 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HCN1O60741 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.4■□□□□ 0.7
HCN1O60741 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCN1O60741 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HCN1O60741 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HCN1O60741 AP004607.7-201ENST00000527152 1677 ntBASIC19.4■□□□□ 0.7
HCN1O60741 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HCN1O60741 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HCN1O60741 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HCN1O60741 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HCN1O60741 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.39■□□□□ 0.7
HCN1O60741 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCN1O60741 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HCN1O60741 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.39■□□□□ 0.69
HCN1O60741 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCN1O60741 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.39■□□□□ 0.69
HCN1O60741 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
HCN1O60741 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCN1O60741 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCN1O60741 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.39■□□□□ 0.69
HCN1O60741 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.39■□□□□ 0.69
HCN1O60741 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.39■□□□□ 0.69
HCN1O60741 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.39■□□□□ 0.69
HCN1O60741 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCN1O60741 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCN1O60741 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.39■□□□□ 0.69
HCN1O60741 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCN1O60741 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HCN1O60741 AC005229.4-201ENST00000610085 2198 ntBASIC19.39■□□□□ 0.69
HCN1O60741 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCN1O60741 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCN1O60741 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCN1O60741 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HCN1O60741 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.38■□□□□ 0.69
HCN1O60741 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCN1O60741 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HCN1O60741 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HCN1O60741 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.38■□□□□ 0.69
HCN1O60741 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HCN1O60741 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.38■□□□□ 0.69
HCN1O60741 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCN1O60741 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.38■□□□□ 0.69
HCN1O60741 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.38■□□□□ 0.69
HCN1O60741 AC026471.6-201ENST00000622954 1905 ntBASIC19.38■□□□□ 0.69
HCN1O60741 AC055733.4-201ENST00000638462 1354 ntBASIC19.38■□□□□ 0.69
HCN1O60741 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.37■□□□□ 0.69
HCN1O60741 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCN1O60741 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.37■□□□□ 0.69
HCN1O60741 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HCN1O60741 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms