Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 BAALC-201ENST00000297574 801 ntTSL 3 BASIC24.47■■□□□ 1.51
CTNND1O60716 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.47■■□□□ 1.51
CTNND1O60716 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.47■■□□□ 1.51
CTNND1O60716 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC24.47■■□□□ 1.51
CTNND1O60716 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.47■■□□□ 1.51
CTNND1O60716 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.47■■□□□ 1.51
CTNND1O60716 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CTNND1O60716 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.47■■□□□ 1.51
CTNND1O60716 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.47■■□□□ 1.51
CTNND1O60716 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
CTNND1O60716 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.47■■□□□ 1.51
CTNND1O60716 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CTNND1O60716 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CTNND1O60716 C1orf229-201ENST00000623686 2258 ntBASIC24.46■■□□□ 1.51
CTNND1O60716 AC068473.5-201ENST00000616428 2072 ntBASIC24.46■■□□□ 1.51
CTNND1O60716 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CTNND1O60716 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CTNND1O60716 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CTNND1O60716 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CTNND1O60716 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC24.46■■□□□ 1.51
CTNND1O60716 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC24.46■■□□□ 1.51
CTNND1O60716 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CTNND1O60716 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.46■■□□□ 1.51
CTNND1O60716 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
CTNND1O60716 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.51
CTNND1O60716 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
CTNND1O60716 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CTNND1O60716 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CTNND1O60716 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CTNND1O60716 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CTNND1O60716 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.45■■□□□ 1.5
CTNND1O60716 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CTNND1O60716 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
CTNND1O60716 AC008403.3-201ENST00000598924 454 ntBASIC24.45■■□□□ 1.5
CTNND1O60716 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CTNND1O60716 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CTNND1O60716 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
CTNND1O60716 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CTNND1O60716 STX5-203ENST00000394690 1568 ntTSL 5 BASIC24.45■■□□□ 1.5
CTNND1O60716 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CTNND1O60716 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CTNND1O60716 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CTNND1O60716 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
CTNND1O60716 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CTNND1O60716 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CTNND1O60716 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
CTNND1O60716 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CTNND1O60716 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CTNND1O60716 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC24.44■■□□□ 1.5
CTNND1O60716 KRT18P68-201ENST00000392293 1000 ntBASIC24.44■■□□□ 1.5
CTNND1O60716 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CTNND1O60716 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC24.44■■□□□ 1.5
CTNND1O60716 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.44■■□□□ 1.5
CTNND1O60716 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC24.44■■□□□ 1.5
CTNND1O60716 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CTNND1O60716 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CTNND1O60716 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.43■■□□□ 1.5
CTNND1O60716 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CTNND1O60716 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
CTNND1O60716 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CTNND1O60716 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.43■■□□□ 1.5
CTNND1O60716 AC007322.3-201ENST00000426526 701 ntBASIC24.43■■□□□ 1.5
CTNND1O60716 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CTNND1O60716 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CTNND1O60716 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CTNND1O60716 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC24.43■■□□□ 1.5
CTNND1O60716 FAM99A-202ENST00000538190 1989 ntBASIC24.43■■□□□ 1.5
CTNND1O60716 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.43■■□□□ 1.5
CTNND1O60716 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.42■■□□□ 1.5
CTNND1O60716 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24.42■■□□□ 1.5
CTNND1O60716 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CTNND1O60716 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CTNND1O60716 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CTNND1O60716 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CTNND1O60716 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CTNND1O60716 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.42■■□□□ 1.5
CTNND1O60716 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC24.42■■□□□ 1.5
CTNND1O60716 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC24.42■■□□□ 1.5
CTNND1O60716 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
CTNND1O60716 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.42■■□□□ 1.5
CTNND1O60716 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CTNND1O60716 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.41■■□□□ 1.5
CTNND1O60716 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CTNND1O60716 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CTNND1O60716 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CTNND1O60716 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CTNND1O60716 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.41■■□□□ 1.5
CTNND1O60716 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CTNND1O60716 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
CTNND1O60716 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CTNND1O60716 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CTNND1O60716 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CTNND1O60716 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.41■■□□□ 1.5
CTNND1O60716 RPS2P4-201ENST00000476944 856 ntBASIC24.41■■□□□ 1.5
CTNND1O60716 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CTNND1O60716 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CTNND1O60716 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CTNND1O60716 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.4■■□□□ 1.5
CTNND1O60716 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CTNND1O60716 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms