Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PEX1O43933 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.21■□□□□ 0.83
PEX1O43933 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PEX1O43933 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.21■□□□□ 0.83
PEX1O43933 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PEX1O43933 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.21■□□□□ 0.83
PEX1O43933 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PEX1O43933 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.21■□□□□ 0.83
PEX1O43933 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PEX1O43933 OXCT2P1-201ENST00000447263 1535 ntBASIC20.21■□□□□ 0.83
PEX1O43933 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PEX1O43933 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PEX1O43933 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PEX1O43933 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEX1O43933 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PEX1O43933 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEX1O43933 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PEX1O43933 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PEX1O43933 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.2■□□□□ 0.82
PEX1O43933 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PEX1O43933 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.2■□□□□ 0.82
PEX1O43933 AC087623.3-201ENST00000607047 1098 ntBASIC20.2■□□□□ 0.82
PEX1O43933 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.2■□□□□ 0.82
PEX1O43933 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEX1O43933 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEX1O43933 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PEX1O43933 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEX1O43933 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEX1O43933 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEX1O43933 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PEX1O43933 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PEX1O43933 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PEX1O43933 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PEX1O43933 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.19■□□□□ 0.82
PEX1O43933 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX1O43933 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX1O43933 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX1O43933 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX1O43933 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.19■□□□□ 0.82
PEX1O43933 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX1O43933 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.19■□□□□ 0.82
PEX1O43933 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.19■□□□□ 0.82
PEX1O43933 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PEX1O43933 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.19■□□□□ 0.82
PEX1O43933 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX1O43933 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX1O43933 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX1O43933 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX1O43933 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PEX1O43933 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX1O43933 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PEX1O43933 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX1O43933 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.18■□□□□ 0.82
PEX1O43933 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
PEX1O43933 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX1O43933 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PEX1O43933 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX1O43933 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX1O43933 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX1O43933 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX1O43933 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.18■□□□□ 0.82
PEX1O43933 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.18■□□□□ 0.82
PEX1O43933 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX1O43933 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PEX1O43933 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX1O43933 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX1O43933 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.18■□□□□ 0.82
PEX1O43933 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.18■□□□□ 0.82
PEX1O43933 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.18■□□□□ 0.82
PEX1O43933 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.17■□□□□ 0.82
PEX1O43933 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX1O43933 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX1O43933 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.17■□□□□ 0.82
PEX1O43933 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX1O43933 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX1O43933 MIR572-201ENST00000384983 95 ntBASIC20.17■□□□□ 0.82
PEX1O43933 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.17■□□□□ 0.82
PEX1O43933 AP005435.1-201ENST00000529293 1178 ntBASIC20.17■□□□□ 0.82
PEX1O43933 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.17■□□□□ 0.82
PEX1O43933 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.17■□□□□ 0.82
PEX1O43933 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX1O43933 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.17■□□□□ 0.82
PEX1O43933 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PEX1O43933 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX1O43933 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX1O43933 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.17■□□□□ 0.82
PEX1O43933 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PEX1O43933 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX1O43933 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PEX1O43933 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX1O43933 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PEX1O43933 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX1O43933 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.16■□□□□ 0.82
PEX1O43933 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX1O43933 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX1O43933 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX1O43933 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX1O43933 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.16■□□□□ 0.82
PEX1O43933 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX1O43933 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms